Gene Information

Name : vicR (SUB0552)
Accession : YP_002735123.1
Strain : Streptococcus uberis 0140J
Genome accession: NC_012004
Putative virulence/resistance : Virulence
Product : response regulator protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 521479 - 522189 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAATTCTTATCGTGGATGATGAAAAACCCATCTCTGATATTATCAAGTTTAATTTAACCAAGGAAGGCTATGA
CATTGTGACAGCTTTCGATGGTAAAGAAGCGGTTCTTGCTTTTGAGGAAGAAAAGCCTGACTTAGTGATTTTGGATTTGA
TGTTACCAGAAATGGATGGTTTAGAAGTCGCCAAAGAAATTCGTAAAACCAGTCATATTCCTATCATTATGCTTTCAGCT
AAAGACAGTGAATTTGATAAGGTTATCGGATTAGAAATTGGGGCCGATGACTACGTCACAAAACCTTTCTCTAATCGTGA
ATTATTGGCACGTGTAAAAGCGCATTTGCGAAGGACCGAAACTATTGAATCAGCGGTAGCAGAGGAAAATGCGTCTGCAG
GCAGTCAAGAGTTGACTATCGGTAATTTACAAATATTGCCGGATGCCTTTTTAGCCAAAAAATATGGAAAAGAAGTTGAA
TTAACCCATCGTGAATTTGAGCTTTTACATCATTTGGCCAACCACATTGGTCAGGTCATGACACGTGAGCACCTTTTAGA
AACAGTATGGGGTTATGATTATTTTGGAGATGTGCGTACTGTTGACGTGACAGTTCGTCGCCTAAGAGAAAAAATAGAAG
ATACACCAAGCCGTCCGGAATACATTTTGACAAGACGTGGCGTTGGCTATTACATGAAATCACATGACTGA

Protein sequence : 
MKKILIVDDEKPISDIIKFNLTKEGYDIVTAFDGKEAVLAFEEEKPDLVILDLMLPEMDGLEVAKEIRKTSHIPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTETIESAVAEENASAGSQELTIGNLQILPDAFLAKKYGKEVE
LTHREFELLHHLANHIGQVMTREHLLETVWGYDYFGDVRTVDVTVRRLREKIEDTPSRPEYILTRRGVGYYMKSHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-36 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_002735123.1 response regulator protein NC_012469.1.7685629. Protein 5e-82 78
vicR YP_002735123.1 response regulator protein HE999704.1.gene2815. Protein 2e-48 53
vicR YP_002735123.1 response regulator protein NC_002952.2859905.p0 Protein 7e-49 50
vicR YP_002735123.1 response regulator protein NC_009782.5559369.p0 Protein 9e-49 50
vicR YP_002735123.1 response regulator protein NC_002951.3237708.p0 Protein 9e-49 50
vicR YP_002735123.1 response regulator protein NC_002758.1121668.p0 Protein 9e-49 50
vicR YP_002735123.1 response regulator protein NC_003923.1003749.p0 Protein 6e-49 50
vicR YP_002735123.1 response regulator protein NC_009641.5332272.p0 Protein 9e-49 50
vicR YP_002735123.1 response regulator protein NC_013450.8614421.p0 Protein 9e-49 50
vicR YP_002735123.1 response regulator protein NC_007793.3914279.p0 Protein 9e-49 50
vicR YP_002735123.1 response regulator protein NC_007622.3794472.p0 Protein 7e-49 50
vicR YP_002735123.1 response regulator protein NC_002745.1124361.p0 Protein 9e-49 50
vicR YP_002735123.1 response regulator protein NC_012469.1.7686381. Protein 9e-41 48
vicR YP_002735123.1 response regulator protein AE016830.1.gene1681. Protein 5e-42 47
vicR YP_002735123.1 response regulator protein AF155139.2.orf0.gene Protein 1e-38 45
vicR YP_002735123.1 response regulator protein FJ349556.1.orf0.gene Protein 4e-39 44
vicR YP_002735123.1 response regulator protein DQ212986.1.gene4.p01 Protein 1e-38 44
vicR YP_002735123.1 response regulator protein CP004022.1.gene3215. Protein 2e-32 44
vicR YP_002735123.1 response regulator protein AF162694.1.orf4.gene Protein 2e-35 43
vicR YP_002735123.1 response regulator protein AM180355.1.gene1830. Protein 3e-38 43
vicR YP_002735123.1 response regulator protein AE015929.1.gene1106. Protein 2e-29 43
vicR YP_002735123.1 response regulator protein BAC0533 Protein 4e-30 43
vicR YP_002735123.1 response regulator protein CP000647.1.gene4257. Protein 4e-30 43
vicR YP_002735123.1 response regulator protein CP001918.1.gene5135. Protein 6e-25 43
vicR YP_002735123.1 response regulator protein AE000516.2.gene3505. Protein 2e-33 42
vicR YP_002735123.1 response regulator protein CP000034.1.gene3834. Protein 8e-30 42
vicR YP_002735123.1 response regulator protein NC_002695.1.915041.p Protein 8e-30 42
vicR YP_002735123.1 response regulator protein CP001138.1.gene4273. Protein 1e-29 42
vicR YP_002735123.1 response regulator protein NC_005054.2598277.p0 Protein 1e-36 41
vicR YP_002735123.1 response regulator protein NC_014475.1.orf0.gen Protein 1e-36 41
vicR YP_002735123.1 response regulator protein CP001138.1.gene2239. Protein 3e-28 41
vicR YP_002735123.1 response regulator protein CP000034.1.gene2186. Protein 1e-27 41
vicR YP_002735123.1 response regulator protein NC_002695.1.916589.p Protein 1e-27 41
vicR YP_002735123.1 response regulator protein BAC0596 Protein 3e-28 41
vicR YP_002735123.1 response regulator protein BAC0039 Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vicR YP_002735123.1 response regulator protein VFG1563 Protein 2e-36 43
vicR YP_002735123.1 response regulator protein VFG1702 Protein 2e-36 42
vicR YP_002735123.1 response regulator protein VFG1389 Protein 8e-31 41