|
Name : tkt2 (SUB0291) Accession : YP_002561652.1 Strain : Streptococcus uberis 0140J Genome accession: NC_012004 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 286489 - 288474 bp Length : 1986 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGACATTTGATGCAGTTGATCAGTTGGCAGTGAATACTGTCCGTACACTTTCTATGGATGCTATTCAAAAGGCAAATTC AGGTCACCCTGGCTTACCAATGGGTGCAGCCCCAATGGCATATGTGTTGTGGAATCGTTTCATGACCGTTAACCCCAAAA CAAGCCGCAATTGGACAAACCGTGACCGCTTTGTTTTATCAGCAGGACATGGAAGTGCCATGTTATATAGTCTCTTACAC CTAGCAGGCTATAATCTTTCTATTGAGGATATTAAGAATTTCCGCCAATGGGGATCTAAAACCCCAGGACATCCTGAAGT CAATCACACAGATGGCGTTGAAGCAACTACTGGACCACTTGGTCAAGGTATTGCCAACGCAGTCGGTTTAGCCATGGCCG AAGCTCACCTTGCAGCTAAATACAATAAACCAGGATATAATATTGTAGATCATTACACCTATGCCTTGAATGGTGACGGG GACTTGATGGAAGGCGTCAGCCAGGAAGCAGCTAGCTTAGCCGGCCACTTAAAACTAGGGAAATTAGTCCTTCTTTATGA TTCAAATGACATTTCACTTGATGGTCCAACATCAATGGCTTTCACAGAAGATGTTAAAGGTCGTTTTGAAGCCTATGGAT GGCAACATATCTTAGTTAAAGACGGTAATGATTTAGAAGCAATTGCCAAAGCTCTTGAAGAAGCTAAAGCTGAAACTCAA AAACCAACCATTATTGAAGTCAAAACTATCATTGGTTACGGTGCTGAAAAACAAGGAACTTCAGCCGTCCATGGCGCTCC TCTAGGTGCAGAAGGCATTGCATTTGCTAAAAAAGCTTACCAATGGACAGCTGAAGACTTCGAAGTACCAGCAGAAGTTT CAAAACGTTTCGAAGAAGGAATTCAAACAAAAGGTGCACAAGCAGAAGCAGCTTGGAATGAGCTTTTTGCAGCTTATGAA AAAGAGTACCCAGAATTAGCAGCTGATTATAAAGCAGCTTTTGCAAACGAGCCAGTGTCAGTTGACTTGGCAGCACATGA ACTTGGTACATCAAAAGCAAGTCGTGTATCAAGTCAGGAAGCTATTCAACAAATTTCAGAACAAGTGTCATCATTCTGGG GAGGTTCAGCAGACCTTTCAGCATCTAATAACACAATGGTCAAAGTAGAAAAAGACTTCCAGCCAGGTCAATATGAAGGA CGTAACATATGGTTTGGCGTTCGTGAATTTGCCATGGCTGCAGCTATGAATGGTATTGCTCTACATGGTGGAACTCGTGT CTACGGTGGAACATTCTTCGTCTTCTCAAACTATCTCTTACCAGCTGTACGTATGGCAGCTCTTCAAAACCTACCAACAA TGTATGTCATGACACATGATTCCATTGCAGTTGGTGAAGATGGTCCAACTCATGAACCAATTGAACAGTTAGCAAGTGTC CGTTCAATGCCAAACTTGAACGTCATTCGTCCAGCAGATGGTAATGAAACCAATGCCGCATGGAAACGTGCCTTAGCAGA AACAGATAAACCAACAATGCTAGTGTTAACACGACAAAACTTGCCAGTTCTTGAAGGAACAAAAGAGTTAGCAGAAGAAG GTTTAAATAAGGGTGCTTATATCTTGTCAGAAGCCAAAGGCGAAATGGATGGTATCATCATTGCGACGGGATCTGAAGTG AAATTAGCCATGGATACACAGGCTGCGCTAGCAGAAGAAGGAATCCATGTTCGTGTCGTATCAATGCCATCACAAAATAT CTTTGATGTGCAAAGCGACGCTTATAAAGAAGAGATTTTACCAGCCGCAATCACAAAACGCCTGGCAATTGAAGCAGCAT CAAGCTTTGGTTGGGCAAAATATGTAGGCTTAGCTGGCAAAACCTTAACCATTGACACATGGGGAGCTTCAGCACCAGGA AATCGTATCTTTGAAGAATATGGTTTCACAACAGAAAATGCTACAGCCCTATACAAATCATTATAA Protein sequence : MTFDAVDQLAVNTVRTLSMDAIQKANSGHPGLPMGAAPMAYVLWNRFMTVNPKTSRNWTNRDRFVLSAGHGSAMLYSLLH LAGYNLSIEDIKNFRQWGSKTPGHPEVNHTDGVEATTGPLGQGIANAVGLAMAEAHLAAKYNKPGYNIVDHYTYALNGDG DLMEGVSQEAASLAGHLKLGKLVLLYDSNDISLDGPTSMAFTEDVKGRFEAYGWQHILVKDGNDLEAIAKALEEAKAETQ KPTIIEVKTIIGYGAEKQGTSAVHGAPLGAEGIAFAKKAYQWTAEDFEVPAEVSKRFEEGIQTKGAQAEAAWNELFAAYE KEYPELAADYKAAFANEPVSVDLAAHELGTSKASRVSSQEAIQQISEQVSSFWGGSADLSASNNTMVKVEKDFQPGQYEG RNIWFGVREFAMAAAMNGIALHGGTRVYGGTFFVFSNYLLPAVRMAALQNLPTMYVMTHDSIAVGEDGPTHEPIEQLASV RSMPNLNVIRPADGNETNAAWKRALAETDKPTMLVLTRQNLPVLEGTKELAEEGLNKGAYILSEAKGEMDGIIIATGSEV KLAMDTQAALAEEGIHVRVVSMPSQNIFDVQSDAYKEEILPAAITKRLAIEAASSFGWAKYVGLAGKTLTIDTWGASAPG NRIFEEYGFTTENATALYKSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-137 | 51 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-134 | 48 |
