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Name : clpC (SUB1743) Accession : YP_002563015.1 Strain : Streptococcus uberis 0140J Genome accession: NC_012004 Putative virulence/resistance : Virulence Product : stress response-related Clp ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1727213 - 1729654 bp Length : 2442 bp Strand : - Note : - DNA sequence : ATGACAGATTATTCACTCAAAATGCAAGCTATTTTTAAACAAGCACAATACCAAGCGGCGCGTTTTGATAGCCCCTATTT AGAAACTTGGCACCTCTTATTGGCAATGGTTGTTGTTAATAATTCACTAGCTGGCCTTGTTTTTAATGAATTTGAAAATA AGGTTGCCTTGGAAGAATATGAAGCGGCAGCTATCTTAGCCATTGGCAAAGCTCCAAATGATGATATTAAGGAGTTTGAA TATAAAGGTCAGTCAAAAACACTTTCTCATATTTTGTCCTTTGCTGATGCTATTCGAAATGTTACACATGCCAATGAAGT AGGATCAGAGCATGTTCTTTTTGCTATCTTATTAAATCCTGATATTATGGCAACTCGTTTGCTAGAATTAGCTGGATTTA AAATCAAAGATGATGGCAAAGGCGATTTGAAATTGGCTGATTTAAGAAAAGCCATTGAAATTCAAGCTGCTTATAGTAAA GAAACCATTAAAGCTATCTACGAACTCAGAAAACCCAAAAAAGCCAAAACAGGCGGTACTTTCTCAGATATGATGAAACC AGCTGGCACTGCGGGAGAATTATCAGATTATACGAGAGATTTGACAGAAATGGCAAGTCAAGGCTTACTTGAGCCTGTTA TTGGCAGAGAAAAAGAAATCACTCGAATGGTTCAAGTCTTAAGTCGTAAAACGAAAAATAATCCAGTTTTAGTCGGTGAG GCTGGTGTTGGTAAGACAGCATTGGCCTATGGCTTAGCCCAACGGATTGTGACTGGTGAGATTCCATACGAACTTCGTGA TATGCGTGTCTTAGAATTAGACATGATGAGTGTGGTGGCAGGTACGCGTTTTCGTGGTGATTTTGAAGAACGCATGAATC AAATTATTGATGATATTGAAAGTGACGGTCATATCATTCTCTTTGTCGATGAATTACACACTATTATGGGATCTGGCAGT GGTATTGATAGCACTTTAGATGCTGCAAATATCCTCAAACCAGCTCTCTCAAGAGGAACCCTACATATGGTTGGGGCAAC TACTCAAGAAGAGTATCAAAAACATATTGAAAAAGATGCCGCTTTATCTCGTCGTTTCTCAAAAGTTTTGATTGAAGAAC CAAGTATAGAGGATGCCTACAAGATACTATCAGGGTTGAAAAAATCTTACGAAAGCTATCATAATGTCACCATCTCAGAT CAAGCCATCAAAACAGCAGTCAAAGTTGCTCATCGCTATTTGACGAGCAAGCACTTACCTGATTCTGCGATTGATTTATT AGATGAAGCTAGCGCAACGGTTCAAAGTTTCGTCAAAAAAGAGGCGCCAGCCTTCATCACACCAATTGACCAAGCCATCA TAAAAGGTGATTTTAAAACAGTTAGCCAACTTTTGAAAGCTTCCAAGGCTAAGCCCCAGAAACCAACGCCTGTTACTGAA GAAGATATCATGTCTACATTAAGTAAATTGTCAGGAATTCCACTGGAAAAAATTAGCAAGGCAGATAGTCAGAAATACCT TAACCTGGAAAAAGAATTACATAAGCGTGTTATCGGTCAAGAGGATGCAGTCTCAGCAATTTCAAGAGCTATCAGACGCA ATCAGTCTGGTATTCGAACAGGTAAACGTCCAATTGGCTCCTTTATGTTCCTTGGACCGACAGGTGTTGGGAAAACAGAA TTAGCAAAAGCTTTAGCAGAACTCTTATTCGATGATGAATCAGCTCTCATTCGTTTTGATATGTCAGAATACATGGAAAA ATTCGCTGCTAGCCGTTTAAATGGAGCACCTCCAGGATATGTTGGCTATGACGAGGGCGGTGAGTTGACCGAAAAAGTAC GTAACAAACCCTATTCTGTTCTTCTCTTCGATGAAGTTGAAAAAGCCCATCCAGATATCTTTAACGTTTTGTTACAAGTC TTGGATGATGGACAATTAACTGATTCTCGTGGGCGAAAAGTCGATTTTTCAAATACAATCATTATCATGACAAGTAATTT AGGTGCTACAGCGCTTCGAGATGATAAAACGGTTGGATTTGGTGCTAAAGATATCAACCATGATCATTCGGCCATGGAAA AACGCATCTTAGAAGAATTGAAAAAAACCTACCGACCAGAATTTATCAACCGAATTGATGAAAAAGTTGTCTTCCATAGC TTAAGTCAAGAAGACATGCGACAAGTTGTCGCGATTATGGTTCAACCCTTGATTAAGAACTTGGAAGAAAAAGGGATTAC CCTCAAAATACAACCATCTGCATTAAAATATTTGTCTGAAGTCGGTTATGATGTTGAGATGGGGGCAAGACCACTAAGAC GAACCATCCAAACAGAAATCGAAGACAAGTTGTCAGAATTCATTTTATCTGGTCAACTTAAAACTGGTAAGACTTTAAAA ATTGGTATGAGCCAAGGTAAATTAAAATTTGATATGGTCTAA Protein sequence : MTDYSLKMQAIFKQAQYQAARFDSPYLETWHLLLAMVVVNNSLAGLVFNEFENKVALEEYEAAAILAIGKAPNDDIKEFE YKGQSKTLSHILSFADAIRNVTHANEVGSEHVLFAILLNPDIMATRLLELAGFKIKDDGKGDLKLADLRKAIEIQAAYSK ETIKAIYELRKPKKAKTGGTFSDMMKPAGTAGELSDYTRDLTEMASQGLLEPVIGREKEITRMVQVLSRKTKNNPVLVGE AGVGKTALAYGLAQRIVTGEIPYELRDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIESDGHIILFVDELHTIMGSGS GIDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFSKVLIEEPSIEDAYKILSGLKKSYESYHNVTISD QAIKTAVKVAHRYLTSKHLPDSAIDLLDEASATVQSFVKKEAPAFITPIDQAIIKGDFKTVSQLLKASKAKPQKPTPVTE EDIMSTLSKLSGIPLEKISKADSQKYLNLEKELHKRVIGQEDAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTE LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV LDDGQLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDINHDHSAMEKRILEELKKTYRPEFINRIDEKVVFHS LSQEDMRQVVAIMVQPLIKNLEEKGITLKIQPSALKYLSEVGYDVEMGARPLRRTIQTEIEDKLSEFILSGQLKTGKTLK IGMSQGKLKFDMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-147 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_002563015.1 | stress response-related Clp ATPase | VFG0079 | Protein | 3e-168 | 45 |
| clpC | YP_002563015.1 | stress response-related Clp ATPase | VFG0080 | Protein | 8e-134 | 44 |
