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Name : polA (SUB1716) Accession : YP_002562989.1 Strain : Streptococcus uberis 0140J Genome accession: NC_012004 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 1692950 - 1695595 bp Length : 2646 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : ATGGAAAACAAGAATAGATTATTATTAATTGATGGCTCATCTGTAGCCTTTCGTGCCTTTTTTGCTTTATACCAACAGAT TGATCGTTTTAGAAACCAAGCTGGCTTACATACCAATGCTATTTATGGTTTCCATTTAATGCTCGATCATATGATGAAGC GCGTGCAGCCAACACATATCCTGGTGGCTTTTGATGCGGGAAAAACAACCTTCCGTACAGAAATGTACGCGGATTATAAA GGGGGACGTGCCAAAACTCCTGATGAATTCCGTGAACAGTTTCCATACATCAGAGAAATGCTAAAAGCTCTAGGTGTGCC ATATTACGATTTGGTGAACTACGAAGCCGACGATATTATTGGTACTTTGGATAAAATAGCAGAGCGGACAGAAGTGCCAT TTGATGTGACAATAGTCAGTGGTGATAAGGATTTAATTCAATTAACTGACGCTAACACAGTTGTTGAAATCTCCAAAAAA GGAGTTGCCGAATTTGAAGAATTCACTCCGGACTATCTGATGGAAAAGATGGGCATTACCCCAGAACAATTCATTGATTT GAAAGCCCTAATGGGTGACAAATCAGATAATATTCCAGGTGTTACTAAAATTGGTGAGAAGACTGGCTTAAAACTCTTAC AGGAATATGGCAGTTTAGAAGGCATTTATGCAAACGTTGATTCTTTCAAGCCTTCTAAGATGAAAGAGAATTTAATCAAT GATAAAGCGCAAGCCTTTTTATCAAAAACCTTGGCAACTATTGATACCAATGCTCCTATCACAATTGGTTTAGAAGACTT GGTCTATCACGGTCCAAATCATGAGGCACTTGCCTCCTTTTATGATGAGATGGGCTTTGTGCAATTGCGTGCAGCTTTAT CGAATCAATTGCCGAAAGAGCCAGAAGAAGAGATTGTCTACCATGAAGTGGTCGATGACATCAGTCCAGACATGTTCACC GATGATACTTTCATTTATTTTGAACTCTTAAATGACAATTACCACCGTGAAGACATTACAACTTTTGCTTGGGGAAATAC TGAAAACATTTATGTCTCTCAAAATCCTGAAGTCTTGAAAACAGATGTCTTTCAGGCCTTTTTGAGAAAGCCGATGGCAA CCTATGATTTTAAAAGAGCTAAGATCTTATTGAGTCATTTAAACATTGATGTGCCAAGAGGAGCTTTCGATGCCCGTTTG GCCAATTACCTTTTGTCAAATGTTGATGATAATCAGTTGTCAACCATAGCAAGGGTGCATACCAATATCCATTTGGAATC AGATGATGTGGTATACGGAAAAGGGGTGAAACGTGCTTTTCCAGACAAAGGCCTCCTTTTTGCTCATTTAGCCAAAAAAA TCAAAGTTTTGGTTGAAAGCAAAGCGACTATGCTAGACAAGTTGTCTGACCATGATCAACTGGCACTTTTTGAAGACATT GAGATGCCCTTAGCAAATGTTCTCGCAAAGATGGAGATCACTGGTATTAAGGTCAATAAAGAAACCTTAGTTGAAATGGC TGAGCAAAATAAGGTGATTATTGATAGGCTGACGCAAGAAATTTATGACTTGGCTGGTGAAGAATTCAACATTAATTCTC CAAAGCAATTAGGATCGATTTTATTTGAAAAGATGCAATTGCCTATAGAAATGACAAAGAAAACTAAGACAGGTTATTCC ACTGCTGTTGATGTCTTAGAACGTCTAGCCCCAATTGCACCAGTCGTTGCCAAAATATTAGACTACCGTCAAATTACAAA ATTGCAGTCTACCTATTTGATTGGTCTTCAAGATTATATTATGGAAGATGGGAAAATCCATACCAGATATGTTCAGGATT TAACCCAAACAGGTCGACTCTCAAGTATTGATCCCAACCTTCAAAATATCCCTATCCGAATGGAACAGGGGCGCTTGATC CGTAAGGCTTTTACGGCATCGTCAGAAGATGCTCTTTTGTTGAGTTCGGATTATTCTCAAATCGAATTACGTGTCTTAGC TCATATTTCAGGAGATCAACATTTGATTACTGCCTTTAATGAAGATGCGGATATTCACACATCCACAGCTATGCGTGTCT TTGCTATTGACAAGGAAGAAGATGTGACTGCTAACGACCGTCGTAATGCAAAGGCAGTAAACTTTGGAATTGTCTATGGT ATTTCTGATTTTGGCTTATCTAACAATTTAGGCATCAGTCGTCAAAAAGCAAAAGAATACATTAATACTTATTTTGACCG ATATCCAGGAATCAAAGATTATATGGATTCTATTGTTCGGGAAGCTAAAGATAAAGGCTATGTGGAAACACTCTTTAAAC GTCGTCGTGAACTACCAGATATTAATTCACGCAATTTTAATGTGAGATCTTTTGCAGAACGGACAGCTATTAATTCGCCT ATTCAGGGTAGTGCTGCCGATATTCTCAAAATTGCCATGATTAATTTAGATAAGGCCTTAGAAGAGGGGCGCTTCAAAAC AAAAATGCTCTTGCAGGTACATGATGAAATTGTTTTAGAAGTGCCAAAAGATGAACTCGAGAAGGTCAAACAACTGGTCA AAGAAACTATGGAGCATGCTGTTGATTTATCAGTTCCTTTAAGGGCAGATGAAAATTCAGGTAAGAGTTGGTACGAGGCT AAGTAG Protein sequence : MENKNRLLLIDGSSVAFRAFFALYQQIDRFRNQAGLHTNAIYGFHLMLDHMMKRVQPTHILVAFDAGKTTFRTEMYADYK GGRAKTPDEFREQFPYIREMLKALGVPYYDLVNYEADDIIGTLDKIAERTEVPFDVTIVSGDKDLIQLTDANTVVEISKK GVAEFEEFTPDYLMEKMGITPEQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLQEYGSLEGIYANVDSFKPSKMKENLIN DKAQAFLSKTLATIDTNAPITIGLEDLVYHGPNHEALASFYDEMGFVQLRAALSNQLPKEPEEEIVYHEVVDDISPDMFT DDTFIYFELLNDNYHREDITTFAWGNTENIYVSQNPEVLKTDVFQAFLRKPMATYDFKRAKILLSHLNIDVPRGAFDARL ANYLLSNVDDNQLSTIARVHTNIHLESDDVVYGKGVKRAFPDKGLLFAHLAKKIKVLVESKATMLDKLSDHDQLALFEDI EMPLANVLAKMEITGIKVNKETLVEMAEQNKVIIDRLTQEIYDLAGEEFNINSPKQLGSILFEKMQLPIEMTKKTKTGYS TAVDVLERLAPIAPVVAKILDYRQITKLQSTYLIGLQDYIMEDGKIHTRYVQDLTQTGRLSSIDPNLQNIPIRMEQGRLI RKAFTASSEDALLLSSDYSQIELRVLAHISGDQHLITAFNEDADIHTSTAMRVFAIDKEEDVTANDRRNAKAVNFGIVYG ISDFGLSNNLGISRQKAKEYINTYFDRYPGIKDYMDSIVREAKDKGYVETLFKRRRELPDINSRNFNVRSFAERTAINSP IQGSAADILKIAMINLDKALEEGRFKTKMLLQVHDEIVLEVPKDELEKVKQLVKETMEHAVDLSVPLRADENSGKSWYEA K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 80 |
