Gene Information

Name : SUB1038 (SUB1038)
Accession : YP_002562362.1
Strain : Streptococcus uberis 0140J
Genome accession: NC_012004
Putative virulence/resistance : Virulence
Product : glycosyl-1-phosphate-transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1015487 - 1016089 bp
Length : 603 bp
Strand : -
Note : -

DNA sequence : 
ATGTATCAAGTTGTTAAACGATTGTTAGCCATTCTGATTTCCGGACTTGCTATTATCATATTAAGTCCAGTATTATTGGC
TGTTGCTATTGCTATTAAATGTGATTCGAAGGGTCCAGTATTATTTAAACAAAAACGAGTTGGCAAAGACAAACAACATT
TTATGATTTATAAATTTAGATCGATGTATGTTGATGCCCCTGCGGATATGCCGACGCATATGTTAAAGGATCCAACTGCC
ATGATTACAAAAGTAGGAGCGTTTTTACGCAAAACCAGCCTTGATGAATTACCTCAATTGTTTAACATTTTTAAAGGCGA
AATGGCTATTGTAGGACCAAGACCAGCTCTTTGGAATCAATATGATTTGATTGCGGAACGTGACAAATACAATGCTAATA
GCATTCGTCCTGGGTTAACAGGTTGGGCACAAATCAATGGCCGTGACGAATTAGAAATTGAAGAAAAATCACGATTAGAT
GGTTATTATGTAGCACACATGTCCTTTTTAATGGACCTAAAATGTTTTTTTGGAACCTTTATTAGCGTTCTTAAAAGTGA
TGGTGTGGTTGAAGGCGGAACAGGAACGAAAAAGGAGAAATAG

Protein sequence : 
MYQVVKRLLAILISGLAIIILSPVLLAVAIAIKCDSKGPVLFKQKRVGKDKQHFMIYKFRSMYVDAPADMPTHMLKDPTA
MITKVGAFLRKTSLDELPQLFNIFKGEMAIVGPRPALWNQYDLIAERDKYNANSIRPGLTGWAQINGRDELEIEEKSRLD
GYYVAHMSFLMDLKCFFGTFISVLKSDGVVEGGTGTKKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 7e-37 53
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-38 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SUB1038 YP_002562362.1 glycosyl-1-phosphate-transferase VFG1369 Protein 1e-45 63
SUB1038 YP_002562362.1 glycosyl-1-phosphate-transferase VFG1309 Protein 2e-37 51