|
Name : clpL (MCCL_0792) Accession : YP_002560195.1 Strain : Macrococcus caseolyticus JCSC5402 Genome accession: NC_011999 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit ClpL Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 857400 - 859451 bp Length : 2052 bp Strand : + Note : - DNA sequence : ATGAATAATGATATTTTTGGTAATAATTTTGATGAGATTTTTAATAGAATGTTTAATGAAATGAATAAAGGACAGATCTC ACGCAAGTTTTATATTAACGGTCAGGAAGTATCGAGTGAGGCGATTCAGCAACAGCAACAGCAACAGCAACAGCAACATC AACCTCATACTTCACAACAAACGAGCGATAGTTTCTTAAATAAGATAGGAAGAAATTTGACAGAAGAAGCAAGAAACAAC CAATTAGATCCCGTTATAGGTAGAGAATCCGAAGTTCGTCAAGCTGCTGAAGTATTAAGTCGTCGAATTAAGAACAATCC GATACTCGTCGGTGAAGCAGGTGTAGGTAAGACTGCAGTCGTTGAAGGTCTTGCCCAGGCAATTGTAAAAGGGGATGTAC CAGCTTCGATTAAGGATAAGGAAATCATTTCAATCGATGTGTCAGCGCTTGAAGCGGGGACTCAGTATCGTGGTGCGTTT GAAGAGAATGTACAGAAATTACTTGAAGAAGTAAAAGCGCAAGGGAATGTAGTATTATTCATCGATGAAATTCATCAGAT TATTGGCAGTGGGTCGACTGGAGGAGACTCTGGAAGCAAAGGTTTGTCCGATATATTAAAACCAGCGCTTAGTCGTGGTG AGATATCTATTATCGGTGCAACAACACAGGACGAGTATCGCAATAACATAATGAAAGATCCGGCACTTGCTCGTCGTTTT AATGAAGTCGTTGTGAATGAACCGTCGAAAGCAGATACAATTAAAATCTTAAAAGGAATTAAGGAAAATTATGAAAACCA CCATCATGTTAAGATTGATGATGAGGTGATAGAAACAATCGTTGATTTATCTATTCAATATATGCCGGGCCGCATGCTAC CGGATAAAGCAATTGATTTGATGGATATTACAGCAGCGCATGTTTCAGCACGTAATACGGTTGTAGACAAAGTAGAGATT GAAAAAGAAATTGAAGCTCTTGAAGCTGAGAAGTTGCAGGTTGTCGAGCAGGAAGACTTTAATCGTGCGCAGGAATTGCA GATGAAGATTAAAGCATTAAAAGACAAATTATCAGCCGGTGTGGAAAGTAATCATGTCACAAAAGAAGATGTGTCTGCTA CTGTAGAACGCATGACAGGTGTGCCCGTTTCTCAGATGGATGATAATGAAATTGAGCGTCTAAAACATATGCAATCCAGA CTTGCAAGTAAAGTCATCGGTCAGGATGAAGCTGTTCAAGCTGTTGCGAAAGCAATCAGACGTAATCGTGCAGGATTTGA TGATGGTAATCGTCCAATCGGCAGCTTCTTGTTTGTAGGTCCAACAGGTGTCGGTAAGACAGAGCTTGCTAAACAACTCT CTTTAGAACTATTTGGTACGACTGAATCGATGATCCGTCTGGATATGAGTGAATATATGGATCAGACAGCTGTCTCTAAA ATGATCGGTACAACTGCCGGTTACGTTGGATATGATGACAACTCGAATACATTAACTGAACAAGTACGTCGTAATCCATA TTCAGTCATCTTATTAGATGAAATTGAAAAAGCACACCCTCAGGTTCTGACATTGCTGCTGCAAGTATTAGATGACGGTG CTCTGACTGATGGTCAAGGTAATACGGTAAACTTTAAGAATACGATAATAATAGCAACAAGTAATGCATCATTTGGTGAA GACCATGAACGCACATCTATCTATGAAGAGTTAAAAGGATACTTCAGACCTGAATTTTTAAATCGTTTCAATGCGATTGT TGAATTTAAGCATTTAGCTAAAGAAGATTTGAAACAAATTGTAGAACTATTATTACATGATGTGCAGGAGGTAGTTGCAC GTAAATCAATAGATATGGAAGTAACAGAACGTGCGAAAGACTGGTTAGTCGAGCATGGCTATGATCAGGCTTTAGGTGCA AGACCATTACGTCGATTGATCGAAAGTGAAGTGCGTGATTCTATTACGGATTACTATTTAGATCATATTGATGTAAAACA TGTGACCATCGACCTGAATGAAGCTGAAGATGGTTTAATGGTTAAAGAATAA Protein sequence : MNNDIFGNNFDEIFNRMFNEMNKGQISRKFYINGQEVSSEAIQQQQQQQQQQHQPHTSQQTSDSFLNKIGRNLTEEARNN QLDPVIGRESEVRQAAEVLSRRIKNNPILVGEAGVGKTAVVEGLAQAIVKGDVPASIKDKEIISIDVSALEAGTQYRGAF EENVQKLLEEVKAQGNVVLFIDEIHQIIGSGSTGGDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDPALARRF NEVVVNEPSKADTIKILKGIKENYENHHHVKIDDEVIETIVDLSIQYMPGRMLPDKAIDLMDITAAHVSARNTVVDKVEI EKEIEALEAEKLQVVEQEDFNRAQELQMKIKALKDKLSAGVESNHVTKEDVSATVERMTGVPVSQMDDNEIERLKHMQSR LASKVIGQDEAVQAVAKAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLSLELFGTTESMIRLDMSEYMDQTAVSK MIGTTAGYVGYDDNSNTLTEQVRRNPYSVILLDEIEKAHPQVLTLLLQVLDDGALTDGQGNTVNFKNTIIIATSNASFGE DHERTSIYEELKGYFRPEFLNRFNAIVEFKHLAKEDLKQIVELLLHDVQEVVARKSIDMEVTERAKDWLVEHGYDQALGA RPLRRLIESEVRDSITDYYLDHIDVKHVTIDLNEAEDGLMVKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-123 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_002560195.1 | ATP-dependent protease ATP-binding subunit ClpL | VFG0080 | Protein | 3e-137 | 48 |
| clpL | YP_002560195.1 | ATP-dependent protease ATP-binding subunit ClpL | VFG0079 | Protein | 1e-124 | 46 |
