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Name : pdhD (MCCL_0713) Accession : YP_002560116.1 Strain : Macrococcus caseolyticus JCSC5402 Genome accession: NC_011999 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 769273 - 770679 bp Length : 1407 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTAGTTGGAGATTTTCCTATTGAAACAGATACTATTGTAATTGGAGCAGGTCCTGGTGGATATGTTGCAGCAATTCG TGCAGCACAATTAGGACAAAAAGTAACAATCGTAGAAAAAGGAAACTTAGGGGGCGTTTGTCTAAACGTAGGTTGTATTC CTTCAAAAGCAATGCTTTCAGCTTCTCATAAATACGAAACAGCGAAACATTCTGAAGATTACGGAATTAAAGCTGAAAAC GTAACTTTAGATTTCTCTAAAGTTCAAGAATTCAAAAACGGTGTTGTTGAACGTTTAACTGGTGGCGTTGGTTCTTTACT TAAAGGCCGCAAAGTTGAAATCGTTCAAGGTGAAGCTTACTTCGTAGACCAAAACAACTTAAAAGTGATGACTGAAAAAG CATCACAAACTTACACGTTTAAGAATGCGATTATCGCGACTGGATCTCGTCCAATCGAAATTCCAAACTTCAAATTCAAC AAACGTGTGATCGATTCAACAGGTGCATTAGCACTTCCTGAAGTACCTAAACACTTAGTTGTTGTAGGTGGCGGATATAT TGGTTCTGAGTTAGGAACAGCTTACGCGAACTTTGGATCTAAAGTTACAATTTTAGAAGGCGCTAAAGATATCTTAGGCG GTTTCGAAAAACAAATGACACAGGTTGTTAAAAAAGGTCTTAAAGCTAAAGGTGTAGAAATCGTTACTGAAGCAATGGCG AAATCAGCTGAAGAATCAGAAAACGGTGTTAAAGTTACTTATGAAGCTAAAGGCGAAACACATACAATCGAAGCGGACTA CTGCTTAGTAACTGTAGGTCGTCGTCCAAATACTGATGAATTAGGTCTAGAAGGTCTAGGTATTAAAATGACTGATCGTG GTATCATTGAAGTTGACGCTCAAAGCCGTACTTCTGTTGAGAACATCTACGCAATCGGTGATATCGTTCCTGGACCACCA TTAGCACACAAAGCTTCTTATGAAGGTAAAGTTGCAGCTGAAGCTATCTCAGGTGAAAAATCAGAAGTAGATTACTTAGG TATTCCTGCTGTATGTTTCACAGAACCAGAATTAGCGACAGTTGGTTATACTGAAGCTATGGCTAAAGAAGAAGGATTAG ACTTTAAAGCTTCTAAATTCCCTTATGCAGCAAATGGTCGTGCATTATCGATCGGTGAAACTGACGGTTTCTTAAAACTG ATCACACTTAAAGAAGATGGATTATTAATCGGTGCGCAAGTTGCCGGTGCAGGTGCATCTGATGTCATCGCGGAACTTGG TTTAGCGATTGAAACAGGTATGACTGCAGAAGATATTGCATTAACAATCCACGCTCACCCAACATTAGGTGAAATTACGA TGGAAGCAGCAGAAGTTGCAATGGGTCATCCAATTCACACAATGTAA Protein sequence : MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKAMLSASHKYETAKHSEDYGIKAEN VTLDFSKVQEFKNGVVERLTGGVGSLLKGRKVEIVQGEAYFVDQNNLKVMTEKASQTYTFKNAIIATGSRPIEIPNFKFN KRVIDSTGALALPEVPKHLVVVGGGYIGSELGTAYANFGSKVTILEGAKDILGGFEKQMTQVVKKGLKAKGVEIVTEAMA KSAEESENGVKVTYEAKGETHTIEADYCLVTVGRRPNTDELGLEGLGIKMTDRGIIEVDAQSRTSVENIYAIGDIVPGPP LAHKASYEGKVAAEAISGEKSEVDYLGIPAVCFTEPELATVGYTEAMAKEEGLDFKASKFPYAANGRALSIGETDGFLKL ITLKEDGLLIGAQVAGAGASDVIAELGLAIETGMTAEDIALTIHAHPTLGEITMEAAEVAMGHPIHTM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 7e-112 | 50 |
