Gene Information

Name : capL (MCCL_0675)
Accession : YP_002560078.1
Strain : Macrococcus caseolyticus JCSC5402
Genome accession: NC_011999
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein CapL
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 728353 - 729627 bp
Length : 1275 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAGAAAAATCGCAGTAGTAGGATTAGGTTATGTAGGTTTACCCGTAGCAGCTGCATTTGGAAAATTACATGAAGT
TATAGGATTCGATATTAATGAATCAAGAATCCAAGAATTAAAAGACGGATATGATAGAACAAATGAAGTGAAATCTGAAG
ATTTAGCTGCTACAAAAATAAATTTTACTTCTAACAAATCAGATTTAGCCAAAGCAGATTTTATTATTGTTGCTGTACCT
ACACCAATTAATAAAAATAATCAACCTGATTTGACACCCCTTATTAAAGCGAGTGAGACTGTTGGTTCTGCGATGGAAAA
AGGTACAATCGTAGTTTACGAATCAACTGTTTATCCTGGAGCTACAAGAGAAGATTGTGTACCAGTATTAGAACAATTCT
CAGGTTTAAAATGTGGAGAAGACTTCTTTGTTGGTTATTCACCTGAACGTATTAATCCTGGTGATAAAGTACATACATTT
GAAACAATAACAAAAGTTGTGAGTGGGCAAACCCCAGAAGTATTAGAGATTGTAGCCGACGTCTATGGTTCTGTTGTAAA
AGCAGGTGTACATAAAGCACCAACAATTGAGGTTGCTGAAGCTGCTAAAGTTATTGAAAATACTCAACGAGATATAAACA
TCGCTTTAATGAATGAACTTGCATTAATTTTTGATAAAGCAGGGATTAATACGAAAGATGTGCTTGAAGCCGCAGGAACG
AAATGGAACTTCTTAAAGTTCACTCCTGGTTTAGTAGGTGGACATTGTATTGGTGTTGATCCATACTACTTAACACATAA
AGCTCAAGAATTAGGACATCATCCTGAAGTTATTTTATCCGGACGCCGTATTAATGATGGCATGAGCAAGTATATTGCTT
CTAAGATTGTAAAAGAAATGCTGAGCAAAGGATTGACTGTTAATAAATCAAATGTAAATGTATTAGGCTTAACATTTAAG
GAAAATTGTCCAGACTTAAGAAATACAAAAGTAATTGATATCATAAGAGAACTTGAGGAATATGGAATTACTGTAAATGT
ACACGATGCAAAAGCGGATAAAGAAGAAGCTAAAAAGTTTTATAATATTGAATTAAAAGAGGTAAATGAACTTCCTGAAA
CAGATTTAGTTTTATTTGCAGTTTCTCATAATGAATATATTCAAAACAAGGAAGAGTTTCTAAAAAAATTATCGAATAAT
GGGATTGTATTTGATATTAAAGGTATTATTAATAAAGAAGATACCTCAAATAACCAAACAATTTGGAGTTTATAA

Protein sequence : 
MNRKIAVVGLGYVGLPVAAAFGKLHEVIGFDINESRIQELKDGYDRTNEVKSEDLAATKINFTSNKSDLAKADFIIVAVP
TPINKNNQPDLTPLIKASETVGSAMEKGTIVVYESTVYPGATREDCVPVLEQFSGLKCGEDFFVGYSPERINPGDKVHTF
ETITKVVSGQTPEVLEIVADVYGSVVKAGVHKAPTIEVAEAAKVIENTQRDINIALMNELALIFDKAGINTKDVLEAAGT
KWNFLKFTPGLVGGHCIGVDPYYLTHKAQELGHHPEVILSGRRINDGMSKYIASKIVKEMLSKGLTVNKSNVNVLGLTFK
ENCPDLRNTKVIDIIRELEEYGITVNVHDAKADKEEAKKFYNIELKEVNELPETDLVLFAVSHNEYIQNKEEFLKKLSNN
GIVFDIKGIINKEDTSNNQTIWSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-150 73
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-102 53
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-102 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capL YP_002560078.1 capsular polysaccharide biosynthesis protein CapL VFG0431 Protein 9e-103 53