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Name : MCCL_0670 (MCCL_0670) Accession : YP_002560073.1 Strain : Macrococcus caseolyticus JCSC5402 Genome accession: NC_011999 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 722575 - 724365 bp Length : 1791 bp Strand : + Note : - DNA sequence : ATGACAGCTAAAAAAAGGTTAATGTTCTTAATTTTTTTAGATTCAATCATCGTTTCACTTTCTGTCTTTTTCTGCTATTC AATTATCTTTCCATTTTTTAAAGGCAATCAGCTCAATGATTTATTAGTATATTCAGTACTTCTATTGCTAAGTCATCATC TATTTGCATATATATTTAATCTGTATCATCGTGCATGGGAATATGCGAGCATTAATGAACTATTAGCAATCGTAAAAGGC GTTACCGCAAGTATCATATTAACGTCAATCCTTTCCTTAATTATTAATGGGCAAGTCTTCATCCGATTAATATTTATTAC CTGGATGATGCACCTTATATTAATTGGTGGTTCAAGAATCAGCTGGCGAGTTTTAAGACGACATATTCTAGATAAAGATA TTGAATTAATTCCAACCTTGGTTGTAGGTGCGGGTCGTGGAGGAAACTTATTAATTCATCAGATGTTATCAACACCTACA ATGGAGATGAAACCTGTAGTAGTAGTTGATGATGATATAAACAAGAAGAATATTGAATTAACAGATGGAATCAAGGTGAA AGGCACAACTGAAGATATACATAGTTTAGTAACAAAATACGATATTAAACGTATTGTCATCGCTATTCCAAGTCTTGATA AGCAAAAGTTAAATGATATACATAAAGCTGCAACTGAGACGGGGTCAGAAGTTTTAATTATGCCGAATATCGATGATGTG ATGGCTGGTAAACTTGAAGTTTCACAGCTTAAGAAAGTAGAAGTAGAAGATTTGTTGGGTCGTGATCCTATTGAACTTGA TGATCAAGGGATTTTAGAACAAATAGAAGGTAAGACTATACTTGTTACAGGTGCTGGAGGCTCTATCGGCTCCGAATTGT GTCGTCAAATTGTAAAATACAAACCCAGACGTCTTGTAGTGTTAGGACATGGAGAAAATTCGATTTACTTAATCAACGAA GAATTAAACAATAAGCTGCTGGGTAGTGTTGAAATTATTCCAATAATTGCAGATGTGCAGGATAGAGAGCGTATGTTTAA ACAAATGTTGAAGTATAAACCGGATATTGTGTATCATGCTGCTGCCCATAAACATGTTCCATTAATGGAATATAATTCAA CAGAAGCTGTGAAGAATAATATCATTGGAACAAAGAATACTGCAGAGGCTGCTTTAAATGCGAGTGTTAAACGATTTGTA TTGGTATCTACAGATAAAGCAGTTAATCCGCCAAATGTAATGGGTGCTACAAAAAGAATGGCTGAAATGGTGATACAGGC CTTAGATACTCAAAGTAAAACTACTAGATTTGTAGCTGTAAGATTTGGAAATGTTTTAGGATCTAGAGGTTCAGTGATAC CTAAGTTTAAACAGCAAATTGAAGCTGGAGGTCCTGTAACTGTTACACATCCAGATATGACACGTTATTTTATGACTATA CCAGAAGCCTCTAGATTAGTCATTCAAGCAGGTGCACTTGCAAATGGTGGAGAAATATTTGTACTTGACATGGGTGAACC TGTTAAAATAGTTAACCTTGCGAAAAATATGATAAAATTAAGCGGTTTCTCTGAAGAAGATATAAAAATTGAATTTTCAG GTATAAGACCTGGAGAAAAGCTGTTTGAAGAATTATTGGATGCTGATGAAATACATCCTGAACAAATCTATCCTAAAATT TATATTGGAAAAGCGAATGAAATAAATATTGCTGATTTGGAAAATATTATTCCGAAGATATTAAAATCAAATAACCTTAA AGAAGATTTATTAAATTTTATTAAAAAGTAG Protein sequence : MTAKKRLMFLIFLDSIIVSLSVFFCYSIIFPFFKGNQLNDLLVYSVLLLLSHHLFAYIFNLYHRAWEYASINELLAIVKG VTASIILTSILSLIINGQVFIRLIFITWMMHLILIGGSRISWRVLRRHILDKDIELIPTLVVGAGRGGNLLIHQMLSTPT MEMKPVVVVDDDINKKNIELTDGIKVKGTTEDIHSLVTKYDIKRIVIAIPSLDKQKLNDIHKAATETGSEVLIMPNIDDV MAGKLEVSQLKKVEVEDLLGRDPIELDDQGILEQIEGKTILVTGAGGSIGSELCRQIVKYKPRRLVVLGHGENSIYLINE ELNNKLLGSVEIIPIIADVQDRERMFKQMLKYKPDIVYHAAAHKHVPLMEYNSTEAVKNNIIGTKNTAEAALNASVKRFV LVSTDKAVNPPNVMGATKRMAEMVIQALDTQSKTTRFVAVRFGNVLGSRGSVIPKFKQQIEAGGPVTVTHPDMTRYFMTI PEASRLVIQAGALANGGEIFVLDMGEPVKIVNLAKNMIKLSGFSEEDIKIEFSGIRPGEKLFEELLDADEIHPEQIYPKI YIGKANEINIADLENIIPKILKSNNLKEDLLNFIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-171 | 64 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-165 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MCCL_0670 | YP_002560073.1 | capsular polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 3e-164 | 62 |
