Gene Information

Name : MCCL_1728 (MCCL_1728)
Accession : YP_002561131.1
Strain : Macrococcus caseolyticus JCSC5402
Genome accession: NC_011999
Putative virulence/resistance : Unknown
Product : S1 RNA binding domain protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1867932 - 1870112 bp
Length : 2181 bp
Strand : -
Note : -

DNA sequence :
TTGTTTTTTATGTTAAAATTAACATATGATTTCAAGGAGGAAGCTATGGAACAACATGTTATTAATTTAATTCTAGAGAA
ATTACCATACAAGAAAGAGCAGATTAATTCGGTATTAACATTACTGGAAGAGAAAAATACTGTTCCGTTTATTGCAAGAT
ATCGTAAAGAAGTAACAGGCGGACTAGATGAAGTTGAAATAAAAGAAATTGAAACAGAATATCGCTATATGGAAAACTTG
CAGAAGCGAAAAGAAGATGTCGTACGTTCGATTGAAGAACAAGGGATGCTTACAGATGAATTAAAGAAAGAGATAATGGA
ACAGACGAAACTGCAGCGTGTCGAAGATCTATACCGACCGTTTAAACAAAAGAAAAAGACACGTGCTACAGAAGCGAAGC
GTAAAGGATTAGAACCTTTAGCGAAAGCGATGCTTAATTATGAAGATGTTGATAAAAAAGCAAAAGATTTTATTACAGAC
GAAGTTACTACCACTGAAGATGCTATTAATGGTGCTATTGATATTATTGCAGAGAAGATTTCTGATGAACCGAAATATCG
CGCCTTTATTTTAGGCTATGTTGAAAAAAATGGAGAAATTACAACTTCAAAGAAGAAAAAGGCAGAAGATGAAAAAGGCG
TATTCGAAATGTATTATGAATACAGTGAACGTATCAATAAAATTGTGCCACATAGAATACTCGCTATCAATCGCGGTGAA
AAAGAGAGTGTGCTTAAAGTAGAAATCTCGGTTGATGAAACAGCGATTGTTCGCTATTTAAGAAAACAGACGATGAAGCG
AGAAAGTATATATAGAGAGCGTGCAATTGAAGAAAGTTTAAAACGATTAATCCTACCTTCTATTTACCGAGAAGTTCGAA
ATGAATTAACGGAGAAAGCTGAATCCCAGGCGATTGAAATCTTTTCGGTAAATCTAGAGAATTTATTATTGCAGGCACCA
TTAAAAGGAAAAATGATTCTCGGCTTGGATCCAGCATATCGTACGGGGTGTAAACTGGCGGTTATTAATCCATTTGGTAC
ATTTGTTGAGAAGAGCGTAGTATATCCGCACCCTCCAGTTAGCGAGAAAGGAAAAGCGAAAAAAATCGTATTGAATTTAA
TTAAAAAGCATAATATTGAGCTAGTGGCTATCGGTAATGGAACAGCAAGTAGAGAGTCGGAGCAATTTATCGCTGAAATT
ATTAAAGAAAATAAATTAGAGACGAAATATATCATCGTAAACGAAGCAGGTGCATCTGTATACTCGGCAAGTGATCTCGC
ACGAGCTGAATTTCCGGACTTACAGGTAGAAGAGCGAAGTGCAGTATCCATTGGTCGTCGTGTACAAGATCCGTTATCTG
AACTTGTAAAGATTGATCCAAAGTCAATTGGGGTGGGTCAATACCAGCATGATGTGAATCAGAAATCGTTAAATGAAGCA
CTGACATTCGTGGTAGAAACTGCGGTGAATAAAGTTGGAGTTAATGTGAATACAGCATCGGCACCATTATTACAGTACGT
ATCAGGTTTATCTAAAAGCGTAGCAGAAAACATCATCACCTATAGAATTGAGAACGGACCAATAAAACATCATAAAGAAA
TTGCGAAGATTCCAAGACTCGGCAAGAAGACGTTTGAACAAAGTATAGGTTTTATGCGTATACCTGATGGAGAGGAACCA
CTTGATAACACAGGAATACATCCCGAAAGCTACAAGGTGACATACGAATTACTAAAAAAACTTTCTTTAACTGCAGAGGA
TCTAGGAAGTGATAAATTAAAAGAAAGTATCAATAAAATAGATGTGCACAGTACAGCAGATGAACTTGGTGTCGGTGCAC
CGACACTCGAAGATATAATTACAGCGTTGATGGCGCCAGGAAGAGATCCACGTGAAGACTTTGAGACGCCATTACTTAAA
TCTGATGTGCTTTCTATAGAAGATTTAAGAAAAGGGATGAAATTATCAGGTACGGTCCGTAACGTTGTTGATTTTGGAGC
GTTTGTTGACATTGGTGTGAAGCAGGACGGTCTTGTACATATTTCTAAGCTCTCTGACCGTTTCGTAAAGCATCCGACAG
ATGTAGTATCCGTCGGTGATATTGTTGAAGTATGGATAGAAGATATTATGCATGATAAAGGTAAGGTTGCACTTACAATG
ATTAACGTTGATGGAAAATAA

Protein sequence :
MFFMLKLTYDFKEEAMEQHVINLILEKLPYKKEQINSVLTLLEEKNTVPFIARYRKEVTGGLDEVEIKEIETEYRYMENL
QKRKEDVVRSIEEQGMLTDELKKEIMEQTKLQRVEDLYRPFKQKKKTRATEAKRKGLEPLAKAMLNYEDVDKKAKDFITD
EVTTTEDAINGAIDIIAEKISDEPKYRAFILGYVEKNGEITTSKKKKAEDEKGVFEMYYEYSERINKIVPHRILAINRGE
KESVLKVEISVDETAIVRYLRKQTMKRESIYRERAIEESLKRLILPSIYREVRNELTEKAESQAIEIFSVNLENLLLQAP
LKGKMILGLDPAYRTGCKLAVINPFGTFVEKSVVYPHPPVSEKGKAKKIVLNLIKKHNIELVAIGNGTASRESEQFIAEI
IKENKLETKYIIVNEAGASVYSASDLARAEFPDLQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKSLNEA
LTFVVETAVNKVGVNVNTASAPLLQYVSGLSKSVAENIITYRIENGPIKHHKEIAKIPRLGKKTFEQSIGFMRIPDGEEP
LDNTGIHPESYKVTYELLKKLSLTAEDLGSDKLKESINKIDVHSTADELGVGAPTLEDIITALMAPGRDPREDFETPLLK
SDVLSIEDLRKGMKLSGTVRNVVDFGAFVDIGVKQDGLVHISKLSDRFVKHPTDVVSVGDIVEVWIEDIMHDKGKVALTM
INVDGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 2e-127 42