Gene Information

Name : MCCL_0166 (MCCL_0166)
Accession : YP_002559569.1
Strain : Macrococcus caseolyticus JCSC5402
Genome accession: NC_011999
Putative virulence/resistance : Virulence
Product : cobalamin Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 171494 - 172315 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAGATTACAAGGGAATAAAGTAACAATCAGCTATGGAGACAAAGACATCGTAAAATCATTGGACATTTCCATTCC
AGATCATAAGATTACATCAATCATTGGTCCGAATGGATGTGGTAAATCTACATTACTTAAAGGTTTGTCGCGTATATTAT
CGGTGAAGACAGGTGAAATTATACTTGATGGAAAAAATATTCACGAGCAATCGACAAAAGACGTGGCTAAGAAAATTGCA
GTACTTCCTCAGTCACCCGATGTATCGGATGGTCTAAGTGTAGAGGAGCTTGTAAGTTATGGCAGATTCCCATATCAAAA
AGGCTTCGGACGTCTATCAGCTGAAGATAAGATGGAAATTGACTGGGCACTTCGTGTGACTGGAACATGGGACTATAAAA
CACGTAATGTAAATGATTTGTCAGGTGGTCAGAGACAACGCGTATGGATTGCTATGGCGCTTGCACAAAAGACGGATATT
ATCTTTCTTGACGAACCTACAACGTATCTGGATATTTCACATCAACTTGAAATACTGGAGCTTGTACAAACATTGAATCG
AGAAGAAGGATGCACAATCATTATGGTGCTTCACGATATTAATCAGGCAATTCGCTTTTCTGATCATTTAATTGCAATGA
GAGAAGGTGAGATTATTAAAGAAGGTACGCCAGAAGAAGTTCTGACGAAAGATATATTGGCGAAAGTATTTAATATTGAT
GCGGAGCTATCTAATGATCCACGTAACGGTAAACCGATGCTTGTGACTTATGATTTATTATGCAGACATTATATGAAAGA
TGTAGTTGAAGATTATGAATAG

Protein sequence : 
MSRLQGNKVTISYGDKDIVKSLDISIPDHKITSIIGPNGCGKSTLLKGLSRILSVKTGEIILDGKNIHEQSTKDVAKKIA
VLPQSPDVSDGLSVEELVSYGRFPYQKGFGRLSAEDKMEIDWALRVTGTWDYKTRNVNDLSGGQRQRVWIAMALAQKTDI
IFLDEPTTYLDISHQLEILELVQTLNREEGCTIIMVLHDINQAIRFSDHLIAMREGEIIKEGTPEEVLTKDILAKVFNID
AELSNDPRNGKPMLVTYDLLCRHYMKDVVEDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-56 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-56 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-51 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-51 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-52 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-52 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-59 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-54 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-57 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCCL_0166 YP_002559569.1 cobalamin Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 6e-54 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCCL_0166 YP_002559569.1 cobalamin Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 5e-57 46
MCCL_0166 YP_002559569.1 cobalamin Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 5e-54 45