Gene Information

Name : MCCL_1066 (MCCL_1066)
Accession : YP_002560469.1
Strain : Macrococcus caseolyticus JCSC5402
Genome accession: NC_011999
Putative virulence/resistance : Virulence
Product : response regulator ArlR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1178908 - 1179579 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACGTATTCTAGTAGTTGAAGATGAAGCGAACTTAGCAAGGTTTATTGAGCTAGAGCTTACACATGAATCTTACGC
TGTAACTGTAATGTATGACGGGGAAAGTGGCTTGCAAGAGGCGCTTAGTACTGAATATGACTGTATATTACTCGATATAA
TGCTGCCTAAACTCAATGGACTTGAAGTTTGCAGAAAACTTAGGAGAGAAAAGGAAACCCCTGTAATTATGATTACGGCA
AAAGGTGAGACTTATGACAAAGTGATAGGTCTTGATTATGGTGCAGACGATTATATCGTTAAACCATTTGATATTGAAGA
ATTGCTAGCAAGATTAAGAGCGTTACTGCGCCGCAATAAGAATGAAGATGACAGTGAACATCTGCTCGTTGTAGGAAATC
TCCAGATTGATAAGGAGGCGTTTACTGTCTTATGTGATCATCAGCTTATCGAGCTGACTAAAACTGAATTTGAACTGCTG
AAATTACTTGCGATGAATAAAAGACATGTTATGACAAGAGAAAAAGTGCTTACAGCTATATGGGGCTATGATAATGAGGT
AGAAACAAATGTCGTAGATGTCTACATTCGTTATCTGAGAAACAAACTGAAACCATTTGGTCAGGATCAGCTGATAGAAA
CTGTTCGCGGTGTAGGATATGTCATTCGATGA

Protein sequence : 
MKRILVVEDEANLARFIELELTHESYAVTVMYDGESGLQEALSTEYDCILLDIMLPKLNGLEVCRKLRREKETPVIMITA
KGETYDKVIGLDYGADDYIVKPFDIEELLARLRALLRRNKNEDDSEHLLVVGNLQIDKEAFTVLCDHQLIELTKTEFELL
KLLAMNKRHVMTREKVLTAIWGYDNEVETNVVDVYIRYLRNKLKPFGQDQLIETVRGVGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-21 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCCL_1066 YP_002560469.1 response regulator ArlR NC_010079.5776364.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR NC_002952.2859858.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR NC_007622.3794948.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR NC_003923.1003417.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR NC_013450.8614146.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR NC_002951.3238224.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR NC_007793.3914065.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR NC_002758.1121390.p0 Protein 3e-56 67
MCCL_1066 YP_002560469.1 response regulator ArlR AE015929.1.gene1106. Protein 6e-51 65
MCCL_1066 YP_002560469.1 response regulator ArlR HE999704.1.gene1528. Protein 3e-45 59
MCCL_1066 YP_002560469.1 response regulator ArlR AE016830.1.gene1681. Protein 1e-31 45
MCCL_1066 YP_002560469.1 response regulator ArlR BAC0125 Protein 1e-26 43
MCCL_1066 YP_002560469.1 response regulator ArlR AE000516.2.gene3505. Protein 3e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCCL_1066 YP_002560469.1 response regulator ArlR VFG1390 Protein 1e-31 44
MCCL_1066 YP_002560469.1 response regulator ArlR VFG0596 Protein 2e-21 42
MCCL_1066 YP_002560469.1 response regulator ArlR VFG1389 Protein 5e-24 42