|
Name : ybdM (LF82_2590) Accession : YP_002555498.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 607349 - 607978 bp Length : 630 bp Strand : - Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110 DNA sequence : ATGGGGGATACTATGCAACAACGATTAACGCAGGATTTAACCCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAA AGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTA AAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGAAAAAATCCATT GAAATAGATGGTTTTACCCAACCCATTGTAGTCACGCATACGGATAAAAATGCTCTGGAAATCGTGGATGGTTTTCACCG CCATGAAATTGGTAAAGGCTCATCATCGTTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGC GTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGTCACCAAATCACTGCCATGTCAGAAATCGTC CGAGAACTCAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGTTGCGCCT GAAGCAAATTAACGGCCTGCAAGAGTTGTTTGCCGACCGTCAATTTTCCCGCGCCTGGACGGTTAAATAA Protein sequence : MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLKKSI EIDGFTQPIVVTHTDKNALEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIV RELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQFSRAWTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1644 | AAQ19140.1 | putative ParB-like nuclease | Not tested | PAI I CL3 | Protein | 3e-57 | 58 |
| ibrB | ADD91736.1 | predicted transcriptional regulator IbrB | Not tested | PAI-I AL862 | Protein | 3e-57 | 58 |
| STY4584 | NP_458668.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 7e-55 | 58 |
| Z1204 | NP_286739.1 | hypothetical protein | Not tested | TAI | Protein | 2e-57 | 57 |
| Z1644 | NP_287147.1 | hypothetical protein | Not tested | TAI | Protein | 2e-57 | 57 |
| z1204 | CAD33764.1 | Z1204 protein | Not tested | PAI I 536 | Protein | 3e-56 | 56 |
| t4278 | NP_807876.2 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-55 | 55 |
| ORF_30 | AAZ04440.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 1e-43 | 54 |
| APECO1_3503 | YP_854305.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 2e-43 | 54 |
| c5208 | NP_757056.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 2e-43 | 54 |
| EF0607 | NP_814365.1 | ParB-like nuclease domain-containing protein | Not tested | Not named | Protein | 2e-31 | 53 |
| ef0120 | AAM75321.1 | EF0120 | Not tested | Not named | Protein | 1e-31 | 53 |
| M5005_Spy_0164 | YP_281528.1 | parB-like nuclease | Not tested | Not named | Protein | 2e-30 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ybdM | YP_002555498.1 | hypothetical protein | VFG1505 | Protein | 1e-56 | 56 |
