Gene Information

Name : fepD (LF82_0643)
Accession : YP_002555486.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Virulence
Product : Ferric enterobactin transport system permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 594013 - 595017 bp
Length : 1005 bp
Strand : -
Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110

DNA sequence :
ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAG
CCTGCTCATTGGAGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCGCTCTCCGGCACCTGCCAGAGCGCCGACTGCA
CCATCGTGCTCGACGCACGACTGCCGCGCACCCTTGCCGGTTTACTGGCAGGCGGTGCGCTTGGCCTTGCCGGGGCGTTA
ATGCAAACCCTCACCCGAAACCCACTTGCCGATCCTGGTTTGCTTGGCGTGAACGCCGGTGCCAGTTTTGCCATTGTGCT
GGGCGCGGCGCTGTTTGGTTACTCTTCCGCGCAGGAGCAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCATTGA
TTGTTGCCTTTACCGGCAGTCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTTGCAGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGGCTGACCAGCGGCATCGCCCTGCTTAATCCCGACGTCTACGATCAACTGCGTTTCTGGCAAGCCGGTTC
GCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTGCTTACCGCTGGAGCAACTGCGCTATTACTGA
GCCGCGCGCTGAACAGTTTAAGCCTTGGCAGTGACACCGCGACGGCGCTGGGCAGTCGCGTAGCGCGCACACAGTTGATT
GGTCTGCTGGCAATTACCGTGCTTTGTGGTAGTGCGACGGCGGTAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCC
GCACATGGCGCGCTGGCTGGTAGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTCGCTACCCCTGCCCTGCTGC
TGTTTGCCGATATCATTGGGCGGGTGATTGTTCCCGGCGAACTGCGCGTTTCTGTAGTCAGTGCCTTTATTGGTGCACCA
GTGCTGATCTTCCTCGTACGACGTAAAACGCGAGGTGGCGCATGA

Protein sequence :
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEALSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLTAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAP
VLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 5e-27 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 5e-27 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 5e-27 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 5e-27 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_002555486.1 Ferric enterobactin transport system permease protein VFG0926 Protein 7e-103 99