Gene Information

Name : fepC (LF82_0642)
Accession : YP_002555484.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Virulence
Product : Ferric enterobactin transport ATP-binding protein fepC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 592212 - 593027 bp
Length : 816 bp
Strand : -
Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110

DNA sequence :

ATGACCGAATCAGTAGCCCGTTTGCGCGGCGAACAGTTAACCCTCGGATATGGCAAATATACCGTTGCGGAAAATCTGAC
TGTAGAAATACCTGATGGTCACTTCACGGCAATTATCGGGCCAAATGGCTGCGGTAAATCCACGTTACTGCGTACCTTAA
GCCGCCTGATGACGCCTGCTCACGGGCATGTCTGGCTGGATGGCGAGCACATTCAACATTACGCCAGTAAAGAGGTTGCA
CGCCGGATTGGTCTGTTGGCGCAAAATGCTACCACACCGGGCGATATCACCGTGCAGGAGCTGGTGGCGCGTGGGCGTTA
CCCGCATCAACCGCTGTTTACCCGCTGGCGCAAAGAAGATGAAGACGCGGTAACAAAAGCGATGCAGGCCACGGGAATAA
CTCATCTGGCGGATCAAAGCGTGGACACCCTTTCTGGCGGACAACGCCAGCGAGCGTGGATCGCGATGGTGCTGGCCCAG
GAAACGGCAATTATGCTGCTCGATGAACCCACGACCTGGCTGGATATCAGTCATCAGATTGATTTGCTGGAACTGTTAAG
CGAACTGAACCGCGAGAAAGGCTATACCCTGGCGGCGGTGCTGCACGATCTTAATCAGGCCTGTCGTTACGCCAGCCATT
TGATTGCATTGCGGGAAGGGAAAATTGTTGCTCAGGGAGCACCGAAGGAGATTGTCACTGCTGAACTGATCGAGCGCATT
TATGGTCTGCGCTGCATGATTATTGACGATCCGGTTGCCGGAACGCCGCTCGTGGTGCCGCTCGGACGAACGGCACCTTC
AACCGCAAAGATTTAA

Protein sequence :

MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVA
RRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEDAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI
YGLRCMIIDDPVAGTPLVVPLGRTAPSTAKI

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	4e-59	50
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	3e-49	50
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	4e-59	49
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	4e-59	49
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	3e-59	49
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	3e-59	49
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	1e-55	47
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	1e-55	47
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-47	42
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-47	42
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-47	42
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	3e-47	42
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	1e-45	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fepC	YP_002555484.1	Ferric enterobactin transport ATP-binding protein fepC	BAC0164	Protein	2e-49	50

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fepC	YP_002555484.1	Ferric enterobactin transport ATP-binding protein fepC	VFG0925	Protein	9e-121	100
fepC	YP_002555484.1	Ferric enterobactin transport ATP-binding protein fepC	VFG1042	Protein	2e-49	50