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Name : LF82_700 (LF82_700) Accession : YP_002559038.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4497466 - 4498914 bp Length : 1449 bp Strand : - Note : corresponding to LF82_p700 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGAAAGAGAAAAAAACATCCCTCACCAATAATGAGAATGAATTCGATATAACTGTTTTCCCCTCAATTGTGGAAAAGAG CAAATACCAAGACTCACTGCTCGCCAGTTCCACCGACGCCAGCAAGGCTCTAGAGGCACTGACGAAGAACTCTGGCGTGG ATGCACTCCTCAAAAACCATGATTCACTGTTTGCCGGTTCCACTGCCGCCAGCAAGGCATTCGAGGCAATGACACGCAAC TCCGTTGCGAACACTTTCCTCAAAAACCATGATTCACTGCTTGCCAGCTCCACTGCCGCCAGCAAGGCATTCGAGGCAAT GACACGCAACTCCGTTGCGAACACTTTCCTCAAAAACCATGATTCACTGCTTGCCAGCTCCACTGCCGCCAGCAAGGCAT TCGAGGCAATGACACGCAACTCCGTTGCGAACACTTTCCTCAAAAACCATGATTCACTGTTTGCCGGTTCCACTGCCGCC AGCAAGGCATTCGAGGCAATGACACGCAACTCCGTTGTGAACTCTTTCCTCAAAAACCATGATTCACTGTTTGCCGGTTC CACTGCCGCCAGCAAGGCATTCGAGGCAATGACACGCAACTCCGTTGTGAACTCTTTCCTCAAAAACCATGATTCACTGT TTGCCAGCTCCACTGCCGCCAGCAAGGCATTCGAGGCAATGACACGCAACTCCGTTGTGAACTCTTTCCTCAAAAACCAT GATTCACTGTTTGCCAGCTCCACTGCCGCCAGCAAGGCATTCGAGGCAATGACGCGGAACTCTGGTGTGGCCACTCTTTT CGCAAAGCAAAGAGAATCATTTACCCGGGATTATTTTACTACGAGTATTACTCAACACTTAGATAAATTAAATCCAACCG AGATTCAAAAATTACAGGAAGCTGCTATTCTATTTTCGCGCTCACCTCAAGGCGCAGCCGTTATTGCAACCAATATCAAT ACAGTAGAAATAACAGAGCCCGACGCATTAACAAAATTAAAAAAATACATCGAAGAAAGCCCTGTCACTTCACATTTTAG GAAATTACCTTTATTAGTACAGCTTATCATAATTTATCTTGTAATGACTATGTCCTCTGTTATTTCCGATAAAAACAAAG AGTTAGCAATTTATTTAATTGAAGAATCACAACAATATTTTAGCAAAGTAGAATCACCAAACGCCCATGTTAAGAAATTG ACAAAACAGTTACCCAATGAAATTGATGTAAGTACATTAAAACATATCAGAATAATTACTGGCGAAAACGTCCGATTACG GAATAGACCATCAATGCATGGTGATGTATTGGTCACGTTGCAAAAATACACACCTGTTATCGTTATCGATAAAAGTGATA GAAAATGGCTATATATACAACTATCACTTGGAGATCAAAAGATCTATGGCTGGGTCAATCGTTCCTATACCAAAGCATTA AATCACTAA Protein sequence : MKEKKTSLTNNENEFDITVFPSIVEKSKYQDSLLASSTDASKALEALTKNSGVDALLKNHDSLFAGSTAASKAFEAMTRN SVANTFLKNHDSLLASSTAASKAFEAMTRNSVANTFLKNHDSLLASSTAASKAFEAMTRNSVANTFLKNHDSLFAGSTAA SKAFEAMTRNSVVNSFLKNHDSLFAGSTAASKAFEAMTRNSVVNSFLKNHDSLFASSTAASKAFEAMTRNSVVNSFLKNH DSLFASSTAASKAFEAMTRNSGVATLFAKQRESFTRDYFTTSITQHLDKLNPTEIQKLQEAAILFSRSPQGAAVIATNIN TVEITEPDALTKLKKYIEESPVTSHFRKLPLLVQLIIIYLVMTMSSVISDKNKELAIYLIEESQQYFSKVESPNAHVKKL TKQLPNEIDVSTLKHIRIITGENVRLRNRPSMHGDVLVTLQKYTPVIVIDKSDRKWLYIQLSLGDQKIYGWVNRSYTKAL NH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4679 | NP_458758.1 | putative membrane protein | Not tested | SPI-7 | Protein | 3e-108 | 65 |
| t4370 | NP_807962.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-110 | 63 |
