|
Name : LF82_695 (LF82_695) Accession : YP_002559033.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4490073 - 4491602 bp Length : 1530 bp Strand : + Note : corresponding to LF82_p695 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGACGGCTGACAGTTATCTGGAAATGGTGCTGGTTCTGATGGGCTGGCTGATCAACAACGCGCTGTGGACGATTATTAC CACCACGGGCATTTTCGCTATTCCGCTGGCGTTCAAAATCGCCGGTGTCTGGCTGAAGGTTCGGGAAGAGGGAGATGATG AAGGGAATAAAGGGGCGCTGGCATTACCGCGTATAGAGCATGTCATCTATGTCGCTTTTGTGGTGATCATGTTCTGTGCG ATGCCAATACAGGATGTTGATATCTCGACGATGAAGTTTGATCGCACCCGTTCTTCCCAGTGTGGTGTGAATGTACCTAA GCCAGATGAGTCTGGCTATGGGCCACTGATTGCCGAGCTTAACGGCCAGACTGCGAAAATCCCGGCATGGTGGTATCTGG TACATTCGCTATCGAAAGGGGTGACGCACGCCGCGATAGCCTCTATTCCCTGTGGCAATGACTTCCGGATGCTGCGTTTT GAAGTGCAACATACGAAGCTGATTGATCCGATTATTCGCCAGGAGGTTCAGGAGTTTGCCAGCCAGTGTTATGCGAAGTC GTATTACAAGCTGAAGAACGTGAATTCAGGGCTGTCAGCGGAGACGGTAGATTCCGTTGGCTGGATTGGTTCGGATTTTT TTCTCAATACTGGCGGCTATTACGATTACTACACGTCAACGATGCCCCGGGCGGCGTGGCCTTACAGCGACAGCCGGGAC AGTGGTTATCCAAATGTTGGCCGTGGTGGTTATCCAACCTGTAAAGACTGGTGGAGTGCATCAGGGAAAGGGCTACAAAG CCGTCTGCTGAAAAACTTCGATACCCGAACGATCAATATGATGAAGGCAAAATCCCCCAATAACTGGGAAGAAAGCCTGT TGCGCTGGCTGGTCAGTCCTCAGAATACACAACTTTCTGGTGGTGGTGATACCTACATGATGGGCAATCAGCAGGGGCAG GGAACGGGTATCGATACCGGTATCAAACAGTTCCTGAGTGGGCTGGGGGCGCTGTCAGCACAGACCACGCAGCTACCGGC ATTTGATGCCCTGCGGCAGGCGCTGCCGATGGTGCACAGCATTATATTGATGGCCCTGGTGATCAGCATTCCACTGGTGA TGCTGTTTGGTGCTTACGACCCGAAGGTGGTGGTCACCATTACGTTTGCGATGTTTGCGCTGATCTTTGTTCCCTTCTGG TGGGAGTTGGGCGGCTGGCTGGACGACAAGCTTATCCAGTTGCTGTACGCCAGCTACAAGGGGTATACCAACAGCTTCAA CAACTGGATTGCCAGTACCGGCTCGGATGGCTGGATCATGAATCTGGTGCTGGGGGCGATGTATGTGGTATTGCCGATGT TCTGGTTTGGGGCGGTGAGCTGGAGTGGTGTTCAGATCGGAGGAGCATTATCTTCAGCAGTTGATAATGCCAGCAAAGGT TCGCAACAGGCTGGAGCTAAAGGACCTGGCGTTGCAGGTGAAGTCGTCAAAACGGTAGCAACGAAAGGGGCATCTAAAGG GAAAGGTTAA Protein sequence : MTADSYLEMVLVLMGWLINNALWTIITTTGIFAIPLAFKIAGVWLKVREEGDDEGNKGALALPRIEHVIYVAFVVIMFCA MPIQDVDISTMKFDRTRSSQCGVNVPKPDESGYGPLIAELNGQTAKIPAWWYLVHSLSKGVTHAAIASIPCGNDFRMLRF EVQHTKLIDPIIRQEVQEFASQCYAKSYYKLKNVNSGLSAETVDSVGWIGSDFFLNTGGYYDYYTSTMPRAAWPYSDSRD SGYPNVGRGGYPTCKDWWSASGKGLQSRLLKNFDTRTINMMKAKSPNNWEESLLRWLVSPQNTQLSGGGDTYMMGNQQGQ GTGIDTGIKQFLSGLGALSAQTTQLPAFDALRQALPMVHSIILMALVISIPLVMLFGAYDPKVVVTITFAMFALIFVPFW WELGGWLDDKLIQLLYASYKGYTNSFNNWIASTGSDGWIMNLVLGAMYVVLPMFWFGAVSWSGVQIGGALSSAVDNASKG SQQAGAKGPGVAGEVVKTVATKGASKGKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api56 | CAF28530.1 | putative membrane protein | Not tested | YAPI | Protein | 1e-146 | 56 |
| YE3465 | YP_001007626.1 | hypothetical protein | Not tested | YAPI | Protein | 8e-146 | 55 |
| YpsIP31758_3699 | YP_001402653.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-145 | 55 |
| STY4579 | NP_458664.1 | putative membrane protein | Not tested | SPI-7 | Protein | 3e-108 | 45 |
| t4276 | NP_807874.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-108 | 45 |
| PMI2570 | YP_002152289.1 | hypothetical protein | Not tested | Not named | Protein | 7e-104 | 43 |
| ORF SG48 | AAN62270.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-94 | 42 |
