|
Name : LF82_692 (LF82_692) Accession : YP_002559030.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4487359 - 4488309 bp Length : 951 bp Strand : + Note : corresponding to LF82_p692 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGAAACAGCTTCGACGGCACCGGCTGGCGATTGCATTAGCGTTTGGTTGTGCTGCTCAGCCCTTTGCGGCCGGAGCGAT TAACTCCGCGCAGATCATCGCCAGTGCGTTCTCCCCCCAGTGCCTGGAATACAAAATCGTTGGTATTTGCTACTGGCTGC TTTGTACGCCCGTGGGCTGCGTTGTAAAGACCTCCACCAAAGTACGCCATTACATCCCTAACGCGGTTGTTTCCAGCTAC AACCAGACGGGCAGTAATCCCTGGACGGAAATGTCGTTTCTGGGAACGGGCCTTTCCGGTATTGCTGAAGGTGGCGGTGC GAATGAGCAGAAACGCACCGAGCGGAAAGATAACCTGCAATTCAAAAATGCGGATGTTATTGGTCATCCGGCGCTGGCCG CGCCCGTTTTCAATAAGTTTATGGGACAAATGGGGTATACCTGTTCCGGTCCGGCCACGGCGATGATGCCGTATCTTCTC AGTACCCTTGATGCGGTGATGTGGCGATTTGGCTTGCCGGAGTCGTTTTATCCGGAAGCGATGACGCCCGGACTGCGTGA AGTGGGTTCTACAATGGGCGCGAATATGTGGGGGAACGTTTATCCCCGTAGCGGTTTTGTCACTCAGGTTGATGACTATA AAGCGGCAGCGGTCGTTGCACAGCGTGCGGCAGATGTTGTCACCCGAACCGGGCAAATTCACGTCTATCAACCGATGACG GCCAGAGCCAGCCCGGGCTACTGGCCTCCTTCGGCGGTCACGGAAAACACCGGCACCCGTAATCATAAATGGCAGCTGCT CACGCCGTCGCTGTCCACATCCTGTGCTGTTTTTCCGGACAGCCCCAATCCCATTGCAACCGATGGCAATTACGCCTGGG CGCTATGGCAACCCTACAGCTGTTGTAAGCGTCGCGGCCAGACGTTCCTTTACAGCGTCGATTTTCAATAA Protein sequence : MKQLRRHRLAIALAFGCAAQPFAAGAINSAQIIASAFSPQCLEYKIVGICYWLLCTPVGCVVKTSTKVRHYIPNAVVSSY NQTGSNPWTEMSFLGTGLSGIAEGGGANEQKRTERKDNLQFKNADVIGHPALAAPVFNKFMGQMGYTCSGPATAMMPYLL STLDAVMWRFGLPESFYPEAMTPGLREVGSTMGANMWGNVYPRSGFVTQVDDYKAAAVVAQRAADVVTRTGQIHVYQPMT ARASPGYWPPSAVTENTGTRNHKWQLLTPSLSTSCAVFPDSPNPIATDGNYAWALWQPYSCCKRRGQTFLYSVDFQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph89 | CAI36130.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 1e-84 | 60 |
| YE3467 | YP_001007628.1 | hypothetical protein | Not tested | YAPI | Protein | 5e-72 | 60 |
| unnamed | ABR13357.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-78 | 59 |
| EXA20 | ABD94629.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-78 | 59 |
| api54 | CAF28528.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 3e-77 | 58 |
| YpsIP31758_3701 | YP_001402655.1 | hypothetical protein | Not tested | YAPI | Protein | 9e-77 | 58 |
| RL017 | AAP84144.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 6e-78 | 58 |
| STY4576 | NP_458661.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-83 | 57 |
| t4273 | NP_807871.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-83 | 57 |
| ORF SG51 | AAN62273.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 4e-77 | 57 |
| PMI2573 | YP_002152292.1 | hypothetical protein | Not tested | Not named | Protein | 2e-76 | 55 |
| ORF C43 | AAN62136.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 2e-76 | 55 |
| unnamed | AAX39458.1 | unknown | Not tested | Hrp PAI | Protein | 1e-60 | 53 |
| Pmu_02990 | YP_005176198.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 4e-65 | 52 |
