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Name : LF82_686 (LF82_686) Accession : YP_002559024.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4480024 - 4481433 bp Length : 1410 bp Strand : + Note : corresponding to LF82_p686 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGATTGGCGTGAAGTCCTGCGGTGGTCCTAAGCAGACGCCGGATTCGGCGGATAATACCACTGTTGCCGACCTGACTCA GGAGGAACTGCGCATTCTCGGCATCGAGGGCGACACGCCGCAGGATACGCTGCGTACGCTGGTTGGACGTATTAAAACCA TTCAGACGAATCAGGAAAATCTGGAGAAACAGAATGTTGCACTGGCAGAAGAAAATGCCCGGTTGCAAAACAAGGGCAAT AACGTGGACGGGCGCATCAATGATGCGGTGAATGCCGCCAAACAGGAGAGTACCCAGGCGCAGCAAAAACTTCAGGCTGA ACAGCAGCGGCTGGCTGGCCTGCTGGAATCACTGAAAAATACCGTTCCCGGCCCGGGAGCGGGCAGCAATACTTCCGCAG GCAGTGACTTACCTGTCGGGCTGGGGCTGGGGCTGGAAGATGCCGGGCAGGCCGAAACGGTGGCGCAGGGTACGCTCTGG ATTGAACCGCAGGATGGTGTACAACTGGATCGCAACGGCAAACCGGTGACCGGTGCAGCAGCTGCGACCAATGGCACTGG CACATTCCAGTTCCCCACGGCGTTCGGTGGGCTGAATGACAACGCGATCACTCGTCAGAAAGCCGAACTGGATCGTAATG CGAAAAATCAGCAGGCCATTGAGGAAACCGATCTGCCGGTTTATACCCTGCCGGAAAACTCCACGCTGGTTGGTAGCCAG GCCATGACCGCCCTGCTGGGGCGCGTGCCGATTGATGGCAAAGTCACCGACCCCTATCCCTTTAAAGTGCTTATTGGTAA AGAGAACCTGACCGCCAACGGCATCGAGCTGCCAGATGTCGAAGGCGCGATTGTGTCCGGTACGGCCACCGGCGACTGGG TGTTGTCCTGTGTACGCGGTGAAGTTCACTCCATTACGTTTGTCTTCACTGATGGCACGGTACGCACGGTACCGCAGTCG GCAAAATCCAGCGATGGCAGCAATGGAAAATCCAATGGCGGCAGTATTGGCTGGTTGTCCGATGAGCACGGTATTCCGTG CCTGTCCGGCGACCGCAAAAGCAACGCCTCAACTTACCTCCCCACGTTATTTGCGCTGTCTGCTGCCGGTGCGGCCTCTG ATGTGATGTCCGAAAGCCAGACCACGACCACCACTGACGGAACGTCCATCACCAGTACGTTGACCGGCAGCGCCGGACAG GCTGCGCTGGGCAAGGCGTTATCCGGCGGCACGAACGAGCTGGCGGAATGGGTGAAAGCGCGATACGGCCAGATGTTTGA TGCGATTTACGTTCCTCCCGGCGCGAATGTTGCTGTGCATATTACCCGCCAGATCCCGATTGATTACGAAGAGAAGGGCC GCAAGGTCAAATACGATTTTGATGTCAGCCAGCAACACGAGCTGGATTAA Protein sequence : MIGVKSCGGPKQTPDSADNTTVADLTQEELRILGIEGDTPQDTLRTLVGRIKTIQTNQENLEKQNVALAEENARLQNKGN NVDGRINDAVNAAKQESTQAQQKLQAEQQRLAGLLESLKNTVPGPGAGSNTSAGSDLPVGLGLGLEDAGQAETVAQGTLW IEPQDGVQLDRNGKPVTGAAAATNGTGTFQFPTAFGGLNDNAITRQKAELDRNAKNQQAIEETDLPVYTLPENSTLVGSQ AMTALLGRVPIDGKVTDPYPFKVLIGKENLTANGIELPDVEGAIVSGTATGDWVLSCVRGEVHSITFVFTDGTVRTVPQS AKSSDGSNGKSNGGSIGWLSDEHGIPCLSGDRKSNASTYLPTLFALSAAGAASDVMSESQTTTTTDGTSITSTLTGSAGQ AALGKALSGGTNELAEWVKARYGQMFDAIYVPPGANVAVHITRQIPIDYEEKGRKVKYDFDVSQQHELD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2579 | YP_002152298.1 | hypothetical protein | Not tested | Not named | Protein | 2e-108 | 56 |
| api37 | CAF28511.1 | putative exported protein | Not tested | YAPI | Protein | 3e-105 | 56 |
| YpsIP31758_3707 | YP_001402661.1 | hypothetical protein | Not tested | YAPI | Protein | 6e-104 | 56 |
| YE3484 | YP_001007643.1 | hypothetical protein | Not tested | YAPI | Protein | 4e-100 | 55 |
| t4268 | NP_807865.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-101 | 53 |
| STY4570 | NP_458655.1 | putative exported protein | Not tested | SPI-7 | Protein | 1e-100 | 52 |
| Pmu_03090 | YP_005176208.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 8e-72 | 44 |
| pph82 | CAI36123.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 7e-77 | 42 |
| ORF C49 | AAN62143.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 2e-78 | 42 |
| ORF SG59 | AAN62281.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 6e-73 | 41 |
| RL024 | AAP84151.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 9e-73 | 41 |
| EXA35 | ABD94644.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-73 | 41 |
| unnamed | ABR13364.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 8e-74 | 41 |
