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Name : LF82_685 (LF82_685) Accession : YP_002559023.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4479096 - 4479971 bp Length : 876 bp Strand : + Note : corresponding to LF82_p685 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGAGTTTACGACGATTTTTACTGTCGCTGGCCTGTCTTGCTGCATTACCGGCGCAGGCGGTTGAACTGGTGAAATGGGA GCGTATTCCGCTGCCGGTGGCCCTGCATGTCAATCAGGAGCGCATTGTGTTTGTGAACCGCAATGTGCGCGTCGGATTTC CGCCTGAGCTGAAGGGGAAATTGCGCGTACAAAGTACCGGCGGTGCGGTGTACCTGCAACCCGGGGAGCAGTTTGCCCGA ACCCGCCTGGTGCTTCAGGATGTGGAGAACGGCGAGATGATCCTGCTGGATATCAGCGCTGAAGAGGGTAAAAACGTACT GGAGCCGGTGAGCCTGGTGTATCAGGGGGAGGTCTCCAGCTCGATGGGGGACGGTGATGTTGCGGTGACAGACAATAAAA CCGCAACAACTGGCGAACGACAGTCCACATCGAAACTGAAAGAGAAAAAATCCACCACTCCGCTGCCGGTGGCCCTGACC CGCTATGCCGCGCAAAGTCTGTATGCACCGTCACGGACGATTGAGCCGCTGCCCGGTGTGCATTCCATTTCGCTGGCATT GCCAGACAAGCTCACGTCATTGCTGCCGTCAGAGTCTGTTGAGGTCAGGCCGCTGGCCGCGTGGGGATTGCAGGGCTATA GCGTGGTCGCGCTGACGCTGCGTAACCAGCGTGCGGAGAAAGTGATTCTCGATCCGCGTCGTCTTCAGGGCAATTTCTAC AGCGCGACATTTCAGCATCGCTGGCTGGGTGCGAGCGGTACGCCGGAAGATACCACAACGGTGTATCTGGTGACGAAAGG GCGTCCTGATACCGCGTTTCTTCCTGAGCCAGTGAAGGCGAAAGCAGGCAAAGGAGGGAAGGTCGATGCAGATTAA Protein sequence : MSLRRFLLSLACLAALPAQAVELVKWERIPLPVALHVNQERIVFVNRNVRVGFPPELKGKLRVQSTGGAVYLQPGEQFAR TRLVLQDVENGEMILLDISAEEGKNVLEPVSLVYQGEVSSSMGDGDVAVTDNKTATTGERQSTSKLKEKKSTTPLPVALT RYAAQSLYAPSRTIEPLPGVHSISLALPDKLTSLLPSESVEVRPLAAWGLQGYSVVALTLRNQRAEKVILDPRRLQGNFY SATFQHRWLGASGTPEDTTTVYLVTKGRPDTAFLPEPVKAKAGKGGKVDAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api36 | CAF28510.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-73 | 61 |
| STY4569 | NP_458654.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-73 | 61 |
| t4266 | NP_807864.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-73 | 61 |
| YpsIP31758_3708 | YP_001402662.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-73 | 60 |
| PMI2580 | YP_002152299.1 | hypothetical protein | Not tested | Not named | Protein | 1e-71 | 60 |
| YE3485 | YP_001007644.1 | hypothetical protein | Not tested | YAPI | Protein | 7e-73 | 59 |
| unnamed | ABR13365.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-50 | 50 |
| RL025 | AAP84152.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 7e-50 | 49 |
| EXA36 | ABD94645.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 3e-50 | 49 |
| Pmu_03100 | YP_005176209.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 1e-56 | 49 |
| ORF C50 | AAN62144.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 5e-49 | 49 |
| ORF SG60 | AAN62282.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 5e-43 | 48 |
| pph81 | CAI36122.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 5e-51 | 46 |
