|
Name : LF82_684 (LF82_684) Accession : YP_002559022.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4478440 - 4479096 bp Length : 657 bp Strand : + Note : corresponding to LF82_p684 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGAGTAAGTTTAAAAATGCCCTGAATGCCCGGGATCACCATATCCGGACATTACGGGCGGGATGCGGGGTTTTACTGGT GCTGTTGGTTCTGGCATTGTCCGGCTGGATGATGTCTCCGCGCAATCTGACCATTCACAATCCCCCCGATCTCCGCTCCG GCAGCTCCCGTCCGTGGTGGGAAATCCCTCCCTCAACGGTGTATGCCTTCAGCTTTTATATCTTCCAGCAACTGAACAGC TGGCCGAAGGATGGTGACGTTGATTATCCCTATCGTATTGAGACGTTGTCGGCCTACCTGACACCGACCTGTCAGGAACT GCTGCATAAGGATGCGAAGCAGCGTAAGGACCTGGGCGAATCGCGGGATCGCGTGCGCGGTGTATCGGAAATCCCTGAAC GGGGCTACCGGGATGACAGCGTCACCATTATTGACCGCGATAACTGGCAGGTTCGTCTGGATTTAGTCACCGATGAATAT GTTAACTCCGAGCCGGTTAAACGCTCGCTGGTGCGCTATCCGCTGAAAGTGGTGCGCTGGGATAAAAATCCGGAGGCTAA CCCGTTTGGTCTGGCGCTGGATTGTCTCTCGGAAGCGCCGCAGCGTCTGGAAGCAGCCCCTGTGGTTCAGGAAGAGAAAA AGGGAGTGTTTAACTGA Protein sequence : MSKFKNALNARDHHIRTLRAGCGVLLVLLVLALSGWMMSPRNLTIHNPPDLRSGSSRPWWEIPPSTVYAFSFYIFQQLNS WPKDGDVDYPYRIETLSAYLTPTCQELLHKDAKQRKDLGESRDRVRGVSEIPERGYRDDSVTIIDRDNWQVRLDLVTDEY VNSEPVKRSLVRYPLKVVRWDKNPEANPFGLALDCLSEAPQRLEAAPVVQEEKKGVFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2581 | YP_002152300.1 | hypothetical protein | Not tested | Not named | Protein | 4e-64 | 67 |
| STY4568 | NP_458653.1 | possible exported protein | Not tested | SPI-7 | Protein | 2e-66 | 65 |
| t4265 | NP_807863.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-66 | 65 |
| YE3486 | YP_001007645.1 | hypothetical protein | Not tested | YAPI | Protein | 4e-63 | 60 |
| YpsIP31758_3709 | YP_001402663.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-64 | 60 |
| api35 | CAF28509.1 | putative exported protein | Not tested | YAPI | Protein | 1e-64 | 60 |
| ORF SG61 | AAN62283.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 8e-52 | 55 |
| ORF C51 | AAN62145.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-52 | 53 |
| RL026 | AAP84153.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 5e-40 | 50 |
| unnamed | ABR13366.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-40 | 50 |
| EXA37 | ABD94646.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-40 | 50 |
| pph80 | CAI36121.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 6e-47 | 48 |
| Pmu_03110 | YP_005176210.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 3e-40 | 45 |
