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Name : LF82_678 (LF82_678) Accession : YP_002559016.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4474871 - 4475635 bp Length : 765 bp Strand : + Note : corresponding to LF82_p678 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGTCGCAGATGAACACGTCTTCACCCCCGGTACAGTCGTCAACGCCACCAAAGCCGCACGGTTTTTTTACCGTACTGCT GTGGGATACGCCGATGAACATTATCGGCATGCTGCTGGTTTCGTTATTATTCAGTGTAATTGTGGAGTTCATCGGTATTG CGTTCTTTTGGCCTGATCAGGGAGCGGAACATAGCCGCGCCGTTATGCTGACGGAGAGCGGTTATTTTGCCGAAGGATTT ACGCAAAGTTTGCTGCTGTCATCGCCGGTGGTGACCGTACAGAGCTGGATCGCGCTGGGTTATCAGTGGTTTTTTGTGAA TAGCGGTTTTACTGGCTGGTTGCAGTCGCTTCAGACGACGACTGCCGGAGGCGGTAATGGCGTTACGGATGAACTTAACG CCTGGTGTGCCTGGGCAGTACAGATTGCATATGAATACCTGATGGCGACGATGTATGTGTCGCTGGTCTTCCTGATGCGG GTCACCATTCTGGTGCTGTCGGTGCCGCTATTTGTTCTGGTTGCCATTGTGGGGATCGCGGATGGGATGGTTCGACGCGA TCTCCGTCGCTATGGTGCTGCGTATGAGTCGAGCTTCCTCTACCATCATGCCAAACGCGTGGTGAAGCCAGCAGCATATA TTCCGTGCGTATTGTATTTGTCAGCGCCGTTCGCGGTATATCCGAATTTGTTGCTGTTACCGGCAGCATTGCTGATGGGG CTGGCGATTTCAGTGACGATGGGGAGTTTTAAGAAGTATTTGTGA Protein sequence : MSQMNTSSPPVQSSTPPKPHGFFTVLLWDTPMNIIGMLLVSLLFSVIVEFIGIAFFWPDQGAEHSRAVMLTESGYFAEGF TQSLLLSSPVVTVQSWIALGYQWFFVNSGFTGWLQSLQTTTAGGGNGVTDELNAWCAWAVQIAYEYLMATMYVSLVFLMR VTILVLSVPLFVLVAIVGIADGMVRRDLRRYGAAYESSFLYHHAKRVVKPAAYIPCVLYLSAPFAVYPNLLLLPAALLMG LAISVTMGSFKKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2587 | YP_002152306.1 | hypothetical protein | Not tested | Not named | Protein | 1e-53 | 59 |
| YpsIP31758_3717 | YP_001402671.1 | hypothetical protein | Not tested | YAPI | Protein | 9e-54 | 56 |
| api28 | CAF28502.1 | putative membrane protein | Not tested | YAPI | Protein | 2e-54 | 56 |
| STY4563 | NP_458649.1 | putative membrane protein | Not tested | SPI-7 | Protein | 3e-51 | 55 |
| t4261 | NP_807859.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-51 | 55 |
| YE3492 | YP_001007650.1 | putative inner membrane protein | Not tested | YAPI | Protein | 4e-54 | 55 |
| Pmu_03170 | YP_005176216.1 | integrating conjugative element membrane protein, PFL family | Not tested | ICEPmu1 | Protein | 1e-28 | 42 |
| ORF C64 | AAN62158.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 6e-25 | 41 |
| pph73 | CAI36114.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 1e-29 | 41 |
