|
Name : LF82_674 (LF82_674) Accession : YP_002559012.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4471345 - 4471893 bp Length : 549 bp Strand : + Note : corresponding to LF82_p674 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGTGGCTGGCAATGTTCATCGCACTGCCGGAGTGTCTGGCGGCGCAATCTGTTCCGGAAGGATATCACCGGGTTGCGCA GGCGGAAAATGTTCCTGCCGAAGCGCTGTATAGCCTAGCGCTGACGGAGTCATCCCGCAAGCTGGCGCATGGCGTACGCC CGTGGCCGTGGACAATTAATGTTGCCGGGAAGGGATATCGCTACGCCTCCCGGAATGAAGCCTATCAGGCGCTGTTAGGT TTTATGCGGCGCTATCCGCTCAAGCGTATTGATGTTGGTATTGCGCAAGTCAATCTGGGCTGGAACGGCCACCATTTCAC ATCTACCTGGGAAGCATTTGATCCCTATACCAACCTGCACGTCGCCGCTCGTATTCTGCGAACATGTTACGAGCGTAGCC CCGGGAGCTGGATATCGGCTGCGGGGTGTTATCACCATCCGGCAGGCGGCAAATCAGCGCAAACCTATAAGGCTATCGTG TCGCGCCACCTGGGTACATTGCAGCCGTCTGTACAGACACTGGCGTTTAATCAGGGAGGAACACAATGA Protein sequence : MWLAMFIALPECLAAQSVPEGYHRVAQAENVPAEALYSLALTESSRKLAHGVRPWPWTINVAGKGYRYASRNEAYQALLG FMRRYPLKRIDVGIAQVNLGWNGHHFTSTWEAFDPYTNLHVAARILRTCYERSPGSWISAAGCYHHPAGGKSAQTYKAIV SRHLGTLQPSVQTLAFNQGGTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4559 | NP_458645.1 | hypothetical protein | Not tested | SPI-7 | Protein | 6e-51 | 74 |
| t4257 | NP_807855.1 | hypothetical protein | Not tested | SPI-7 | Protein | 6e-51 | 74 |
| YE3494A | YP_001007653.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-46 | 68 |
| YpsIP31758_3720 | YP_001402674.1 | transglycosylase | Not tested | YAPI | Protein | 8e-47 | 68 |
| api25 | CAF28499.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 5e-47 | 68 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 8e-49 | 66 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-25 | 49 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 4e-28 | 49 |
| RL050 | AAP84175.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 5e-26 | 46 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 2e-28 | 45 |
| ORF C67 | AAN62161.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-26 | 43 |
