Gene Information

Name : LF82_663 (LF82_663)
Accession : YP_002559001.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4459354 - 4459878 bp
Length : 525 bp
Strand : +
Note : corresponding to LF82_p663 in publication : Miquel et al., PLoS One; LF_82

DNA sequence : 
ATGAACGGACTGTTAACGCAGATTGTTATGGAACTGAAATCCGGCAATATCCGCCGTTGTGAGGCGATGGGGTTAACCCT
GGAAGAGATTCAGGAACTTAACAGCTTAACCGTTGAAGATCTGCATTATCTGGTGAATACGCAGGTATCGCTTCTGACCT
TCCGCATCAACCATACCAACCTGAACACCATGCTGGCGCAGGCCCGTCGTGAGCAGACCCGGACACAGCGTATCGACAGA
GCGTTAACGCTGGGTGGCTCTATCGAGCTGATGCAGCATTTTTTCGGCCTGACGGCGACGGAAGTCAGTTCCCGGCGACG
CCTGGTCGGTGTTGTGACCCGGCAGGGGCGCAGCCAGATCCCTACAGAAGAGCAGGAACTGGCGGTGTGGCAGCAGTGGA
AGGCATCGAACGTTGACAACATGGAATCACTGGATGCGCTGGAAGCCATGATGTTAATTGCTGAGCAGCAGGACATTTCG
TTAACCGCAGTCTGGACGTTAACCAAAGGATGGAGTGCCGCCTGA

Protein sequence : 
MNGLLTQIVMELKSGNIRRCEAMGLTLEEIQELNSLTVEDLHYLVNTQVSLLTFRINHTNLNTMLAQARREQTRTQRIDR
ALTLGGSIELMQHFFGLTATEVSSRRRLVGVVTRQGRSQIPTEEQELAVWQQWKASNVDNMESLDALEAMMLIAEQQDIS
LTAVWTLTKGWSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3512 YP_001007674.1 hypothetical protein Not tested YAPI Protein 1e-44 60
STY4526 NP_458621.1 hypothetical protein Not tested SPI-7 Protein 3e-43 57
t4231 NP_807833.1 hypothetical protein Not tested SPI-7 Protein 3e-43 57
YpsIP31758_3745 YP_001402699.1 hypothetical protein Not tested YAPI Protein 3e-43 56
api4 CAF28478.1 hypothetical protein Not tested YAPI Protein 3e-43 55
PMI2637 YP_002152339.1 hypothetical protein Not tested Not named Protein 3e-34 47
YPO1902 YP_002346892.1 hypothetical protein Not tested HPI Protein 2e-29 41
y2407 NP_669714.1 hypothetical protein Not tested HPI Protein 2e-29 41
unnamed CAA21400.1 - Not tested HPI Protein 2e-29 41