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Name : LF82_660 (LF82_660) Accession : YP_002558998.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 4456075 - 4457427 bp Length : 1353 bp Strand : + Note : corresponding to LF82_p660 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGAATAACATCGAACAGATATCGCCGCCGCATTCAATCAGCGCCGAGCAGGCTGTTCTTGGTAGCCTGATGCTGGATAA CGATCGCTGGGATGATATTGCGACGATTGTTTCCGCCGATCGTTTTTATTCGCGGCCGCATGGCGTGATTTTCTCCGCCA TGCAGGCGTTGTTGCTTCAGAATAAGCCTATCGACCTGATAACCCTGGCTGAATCAATGGAGCAGCAAGGGACGCTGGAA CAGTGTGGCGGTTTTGCCTATCTCGCCGAACTCTCGAAAAATACGCCCAGTGCGGCAAATATCGTTGCTTATGCAGAGTA CGTTGCCAGCTACGGCCAGAAGCGTCAGTTACTGGAACTGGGACACGATCTGGTTGTGCAGGCCGGTGATGCCAGAAGTG ATCTGATGGTACTACTGGATGAAGCTGAGCGCCGGATTTTTGCCATTGCCGAACAGCAATCTCCGGATGGCGATGTTGAT CTGCCTGCCTCACTGGAACTCTTCCTCAATCGATTAGAGCGGCGTTGCGGTAGTGAAGATCTTATTACCGGTACGCCAAC CGGCTTTGCTCAACTGAATACGATGACCAGCGGCTTCCAGCCCAGCGATCTGATTCTACTGGCTGGTCGTCCGTCAATGG GGAAAACCGCGTTCGGGTTGGCATTCTGCGAAGGGGCATTAAATGAGCGCCCGGATATGGCGGTGCAGGTCTACAGCCTG GAAATGCCTACCGAGCAGTTACTGATGCGCTTCACCGCCATGCTGGGGGGTGTCCCTCTGCAACACCTGCGCAATGGCGA TATGCAGGATGAAGATTGGGCGCGGGTCAGTGCAGCAATGAAAGTTCTGCTTGAAGACTGGAAAGGCAGGCTGGTGATTG ATGATTCCAGCTATATGACACCGGCGATCCTGCGCTCCCGGGTGAGAAAAAACATCCGTAAATACGGTCATCCATCCATG ATCCTGCTGGACTATCTGCAACTGATGCGCTGCCCGGGGCAGGAGAACCGGACGCAGGAGATCGCGGAAATCTCCCGCTC ACTCAAAGCGCTGGCTAAAGAAATTGGCTGTCCGGTAGTGGCGTTGTCACAGCTCAACCGGTCACTGGAAAGCCGGGCGG ATAAGCGTCCGAATAATGGCGATCTGCGTGACTCCGGGGCGCTGGAGCAGGATGCCGATCTGATAATGTTCGTCTACAGG GACGAAGTGTATGACGCCGATACGCATGAGCCGGGTGTGGCAGAGATTATTCTTGGCAAGCAGCGCAATGGGCCTATCGG CACAATAAAGGTGCAATATCAGGCGGAGATTACCCGTTTTGAGGATTTTACAGGAGGTCGCTATGACTTCTAA Protein sequence : MNNIEQISPPHSISAEQAVLGSLMLDNDRWDDIATIVSADRFYSRPHGVIFSAMQALLLQNKPIDLITLAESMEQQGTLE QCGGFAYLAELSKNTPSAANIVAYAEYVASYGQKRQLLELGHDLVVQAGDARSDLMVLLDEAERRIFAIAEQQSPDGDVD LPASLELFLNRLERRCGSEDLITGTPTGFAQLNTMTSGFQPSDLILLAGRPSMGKTAFGLAFCEGALNERPDMAVQVYSL EMPTEQLLMRFTAMLGGVPLQHLRNGDMQDEDWARVSAAMKVLLEDWKGRLVIDDSSYMTPAILRSRVRKNIRKYGHPSM ILLDYLQLMRCPGQENRTQEIAEISRSLKALAKEIGCPVVALSQLNRSLESRADKRPNNGDLRDSGALEQDADLIMFVYR DEVYDADTHEPGVAEIILGKQRNGPIGTIKVQYQAEITRFEDFTGGRYDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-133 | 62 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-129 | 61 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-129 | 61 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-106 | 56 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-116 | 55 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-116 | 55 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-109 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 8e-92 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 7e-91 | 47 |
