|
Name : LF82_658 (LF82_658) Accession : YP_002558996.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4454826 - 4455701 bp Length : 876 bp Strand : + Note : corresponding to LF82_p658 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGCATGTAATTTCAGTAATTTCTACTAAAGGTGGTGAAGGTAAATCCACTCATTCCGCCAACCTGGCTGGCTTCTGTGC CGATGCCGGTCTCAAAACCCTCCTGATTGACGGCGACTACGCCCAGCCCACGGTTTCCAGTTACTATCCTTTGCGCTACG AAGCGCCATGTGGTTTGTACGAGTTACTTATGCAGACTGTGGATCTTAATCGGCCGGAACAACTGATTTCCCACACTGCC ATTGATAACCTTGATCTGATTATTTCTAACGATCCTTATGGTCAGTTAAAAATGGCAATGATGCACGCTCCGGACGGGCG CATCAGACTACGTAACCAGCTTCAGCATCCATTGTTTGCCTCTTATGACGTGATTATCAGTGATACGCAAGGCGCGCGCT CAATCATGTTAGAGCTGATGTTGTTGGCGACAACACATACGGCACTGGCGGTTGTGAAACCGGTAATACCGGACGTTCGC GAGTTTCTACGGGGAACGGTAACGCTGATGGAGGATCTACTGCCTTACCGTGGATTTGGTATTACCTTGCCGTCAATGAA AATCCTGGTCAACTGCATGGATTACACCCTGCTGGCTGAAGAAGCACTGGGTGCGTTAACTACGATTATTGCTGATGGGA CGTATAGCAAAGCGGATATTCCCCCCGTCACTCTGCTCGAAACCCAAATCTACGATCTTGAAGTCTACAAGTTAGGCCAT ACGCGGGGGCAACCCGCTCACCGTCTTGAATACCATACCGATCGTAAAAGTTTGCCAGCCGCTCAGACTATGCACGATCT GGCCTGCGAATTATTTCCCGAATGGCGCGACCGTTTTGATGCCGTACTGCAAAACCAGCCGAAGGGGGATAAATAA Protein sequence : MHVISVISTKGGEGKSTHSANLAGFCADAGLKTLLIDGDYAQPTVSSYYPLRYEAPCGLYELLMQTVDLNRPEQLISHTA IDNLDLIISNDPYGQLKMAMMHAPDGRIRLRNQLQHPLFASYDVIISDTQGARSIMLELMLLATTHTALAVVKPVIPDVR EFLRGTVTLMEDLLPYRGFGITLPSMKILVNCMDYTLLAEEALGALTTIIADGTYSKADIPPVTLLETQIYDLEVYKLGH TRGQPAHRLEYHTDRKSLPAAQTMHDLACELFPEWRDRFDAVLQNQPKGDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3748 | YP_001402702.1 | hypothetical protein | Not tested | YAPI | Protein | 6e-80 | 65 |
| api1 | CAF28475.1 | putative ATPase | Not tested | YAPI | Protein | 3e-80 | 65 |
| YE3515 | YP_001007677.1 | hypothetical protein | Not tested | YAPI | Protein | 4e-80 | 63 |
| STY4521 | NP_458616.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-80 | 61 |
| t4226 | NP_807828.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-80 | 61 |
| PMI2642 | YP_002152344.1 | chromosome partitioning-like protein | Not tested | Not named | Protein | 4e-76 | 58 |
| unnamed | ABR13462.1 | Soj | Not tested | PAGI-5 | Protein | 1e-41 | 44 |
| soj | CAI36042.1 | ParA-like chromosome partitioning protein | Not tested | PPHGI-1 | Protein | 1e-44 | 43 |
| soj | AAP84239.1 | chromosome partitioning protein | Not tested | PAPI-1 | Protein | 1e-40 | 43 |
| soj | AAN62201.1 | putative chromosome partitioning related protein | Not tested | PAGI-2(C) | Protein | 1e-37 | 42 |
| soj | AAN62324.1 | putative chromosome partitioning related protein | Not tested | PAGI-3(SG) | Protein | 1e-34 | 41 |
