Gene Information

Name : LF82_658 (LF82_658)
Accession : YP_002558996.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4454826 - 4455701 bp
Length : 876 bp
Strand : +
Note : corresponding to LF82_p658 in publication : Miquel et al., PLoS One; LF_82

DNA sequence :
ATGCATGTAATTTCAGTAATTTCTACTAAAGGTGGTGAAGGTAAATCCACTCATTCCGCCAACCTGGCTGGCTTCTGTGC
CGATGCCGGTCTCAAAACCCTCCTGATTGACGGCGACTACGCCCAGCCCACGGTTTCCAGTTACTATCCTTTGCGCTACG
AAGCGCCATGTGGTTTGTACGAGTTACTTATGCAGACTGTGGATCTTAATCGGCCGGAACAACTGATTTCCCACACTGCC
ATTGATAACCTTGATCTGATTATTTCTAACGATCCTTATGGTCAGTTAAAAATGGCAATGATGCACGCTCCGGACGGGCG
CATCAGACTACGTAACCAGCTTCAGCATCCATTGTTTGCCTCTTATGACGTGATTATCAGTGATACGCAAGGCGCGCGCT
CAATCATGTTAGAGCTGATGTTGTTGGCGACAACACATACGGCACTGGCGGTTGTGAAACCGGTAATACCGGACGTTCGC
GAGTTTCTACGGGGAACGGTAACGCTGATGGAGGATCTACTGCCTTACCGTGGATTTGGTATTACCTTGCCGTCAATGAA
AATCCTGGTCAACTGCATGGATTACACCCTGCTGGCTGAAGAAGCACTGGGTGCGTTAACTACGATTATTGCTGATGGGA
CGTATAGCAAAGCGGATATTCCCCCCGTCACTCTGCTCGAAACCCAAATCTACGATCTTGAAGTCTACAAGTTAGGCCAT
ACGCGGGGGCAACCCGCTCACCGTCTTGAATACCATACCGATCGTAAAAGTTTGCCAGCCGCTCAGACTATGCACGATCT
GGCCTGCGAATTATTTCCCGAATGGCGCGACCGTTTTGATGCCGTACTGCAAAACCAGCCGAAGGGGGATAAATAA

Protein sequence :
MHVISVISTKGGEGKSTHSANLAGFCADAGLKTLLIDGDYAQPTVSSYYPLRYEAPCGLYELLMQTVDLNRPEQLISHTA
IDNLDLIISNDPYGQLKMAMMHAPDGRIRLRNQLQHPLFASYDVIISDTQGARSIMLELMLLATTHTALAVVKPVIPDVR
EFLRGTVTLMEDLLPYRGFGITLPSMKILVNCMDYTLLAEEALGALTTIIADGTYSKADIPPVTLLETQIYDLEVYKLGH
TRGQPAHRLEYHTDRKSLPAAQTMHDLACELFPEWRDRFDAVLQNQPKGDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3748 YP_001402702.1 hypothetical protein Not tested YAPI Protein 6e-80 65
api1 CAF28475.1 putative ATPase Not tested YAPI Protein 3e-80 65
YE3515 YP_001007677.1 hypothetical protein Not tested YAPI Protein 4e-80 63
STY4521 NP_458616.1 hypothetical protein Not tested SPI-7 Protein 3e-80 61
t4226 NP_807828.1 hypothetical protein Not tested SPI-7 Protein 3e-80 61
PMI2642 YP_002152344.1 chromosome partitioning-like protein Not tested Not named Protein 4e-76 58
unnamed ABR13462.1 Soj Not tested PAGI-5 Protein 1e-41 44
soj CAI36042.1 ParA-like chromosome partitioning protein Not tested PPHGI-1 Protein 1e-44 43
soj AAP84239.1 chromosome partitioning protein Not tested PAPI-1 Protein 1e-40 43
soj AAN62201.1 putative chromosome partitioning related protein Not tested PAGI-2(C) Protein 1e-37 42
soj AAN62324.1 putative chromosome partitioning related protein Not tested PAGI-3(SG) Protein 1e-34 41