Gene Information

Name : LF82_590 (LF82_590)
Accession : YP_002558672.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4071831 - 4072220 bp
Length : 390 bp
Strand : -
Note : corresponding to LF82_p590 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; ED1a; E2348, S88; SMS_3_5; UTI89

DNA sequence :
ATGACTACAACGCTTTTAGCCGTTAACGGAACGCTGATGCGCGGCCTGGAACTCAACCCAAATATGCAAAAAGCGGGCGG
TATTTTTGTCCGTGAAGACCGAACTGACGCCCATTACCGGTTGTGGAGTATTAATGATCGCCATCCGGGAATGATTCGCG
TGAATGAAGGAGGAACACACGTCGACGTAGAAATTTGGCAATTACCGCTGGCCAGTTTTGCCGCTCTGTTAATGAGCGAA
CCCGCTGGGCTGGCAATTGGCAAAATCAAACTTGCCGATGGTAGCGAAGTGCTGGGCGTACTGGCAGAAAACTGGCTGAC
CGAAGGCCAACGGGAAATTACAGAACTGGGTAGCTGGCGCAAATACACCGGGCATTTTCATACTGTGTAA

Protein sequence :
MTTTLLAVNGTLMRGLELNPNMQKAGGIFVREDRTDAHYRLWSINDRHPGMIRVNEGGTHVDVEIWQLPLASFAALLMSE
PAGLAIGKIKLADGSEVLGVLAENWLTEGQREITELGSWRKYTGHFHTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2637 YP_859421.1 hypothetical protein Not tested Not named Protein 3e-56 100