|
Name : LF82_582 (LF82_582) Accession : YP_002558664.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 4062750 - 4063439 bp Length : 690 bp Strand : - Note : corresponding to LF82_p582 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; S88; UTI89 DNA sequence : TTGGCATTTCCCGATAACTACAACCGTCTGTTTATACCACGGCAAAAAACTAAAGATAATAATGGCCTCAAAACACTCAA TAGTAAAGCGGTTGGCAGACTGCTTGCTGCTGGCGGCATATACAATGGGAATATCGAAGGATTCAGGGAAACAGCAAACA AGTTGGGAGGAGATGCACCTGCTGGTTACGATCAAGTTATGGATAACAAAGGGTTACTCATCGCTGGTGCTTCAATAGTT GCTGGAGTTGTTCTGGGAAGAATGAGATTCCCTGATTTGGAATCATTTGAGCATTTCGGAGCCAGAGGAGCAGTATCAGG AAGACCATTTAATCCCGACCTTGCCGGTGGTCCAATAGAAAACCTGACGATAGATGGCGTAACAATCAATAGGGAAGGTA TCGCTATTGTTGAAAAGCATATCTCCAGATTTGATCATGATCCAGCTAATGATGTAATGATTTCAAGGCTAAAAAAAATA GCAAATAAAGAATTGCTTCCTGAAAAATACGATCTGAACTACTATACTCATGAATGCCGCGAGTATCAGCGTTATTGTAA TTTAGGATGGGAAACAGGTGAACCGAATGGTTTAGATGGATATGAATTATGGAATAATGCACATACTGCAACTCTAGAAG ACTTTAAAATTAAAGATACTGACTTATTTCATCCGGATGCAAAAAAATGA Protein sequence : MAFPDNYNRLFIPRQKTKDNNGLKTLNSKAVGRLLAAGGIYNGNIEGFRETANKLGGDAPAGYDQVMDNKGLLIAGASIV AGVVLGRMRFPDLESFEHFGARGAVSGRPFNPDLAGGPIENLTIDGVTINREGIAIVEKHISRFDHDPANDVMISRLKKI ANKELLPEKYDLNYYTHECREYQRYCNLGWETGEPNGLDGYELWNNAHTATLEDFKIKDTDLFHPDAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2645 | YP_859413.1 | hypothetical protein | Not tested | Not named | Protein | 9e-75 | 100 |
