Gene Information

Name : sgbU (LF82_2129)
Accession : YP_002558432.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 3-epimerase sgbU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3799405 - 3800265 bp
Length : 861 bp
Strand : +
Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110

DNA sequence :
GTGCGTAATCATCCGTTAGGCATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTACTGGCAAA
AAGCTGTGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGTTGTCACGTCTTGACTGGAGCGCCGCAC
AACGTGCTTCGCTGGTCACTGCGATGATCGAAACGGGTGTTGCTATTCCGTCAATGTGCCTGTCCGCACATCGTCGTTTT
CCTTTTGGTAGCCGGGACGACGCCGTGCGCCAGCGGGCGCGGGAGATTATGAGTAAAGCGATTCGCCTGGCGCGCGATCT
CGGCATTCGTACTATTCAACTGGCAGGTTACGACGTCTATTACGAGGATCATGACGAAGGCACCCAGCAACGGTTTGCTG
AAGGGCTGGCGTGGGCGGTTGAACAGGCAGCGGCATCACAAGTCATGCTGGCGGTGGAGATTATGGACACCGCGTTTATG
AACTCTATCAGCAAATGGAAAAAGTGGGACGAAATGCTTGCGTCACCGTGGTTCACCGTTTACCCGGACGTAGGCAACCT
CAGCGCCTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATCGACCGTATCGCCGCCATCCACCTGAAAGACACTC
AACCCGTTACCGAACATAGCCCCGGACAGTTCCGCGATGTGCCGTTTGGCGAAGGCTGTGTCGATTTTGTTGGCATCTTC
AAAACGCTGCATGAGCTGAACTATCGCGGATCATTTCTGATTGAAATGTGGACCGAAAAAGCCAAAGAACCGGTGCTGGA
GATTATTCAGGCGCGGCGCTGGATTGAAGCGCGTATGCAGGAGGCCGGATTTATATGTTAG

Protein sequence :
MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRASLVTAMIETGVAIPSMCLSAHRRF
PFGSRDDAVRQRAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTQQRFAEGLAWAVEQAAASQVMLAVEIMDTAFM
NSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEHSPGQFRDVPFGEGCVDFVGIF
KTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 5e-63 55