Gene Information

Name : garL (LF82_0805)
Accession : YP_002557982.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : 2-dehydro-3-deoxyglucarate aldolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3320293 - 3321063 bp
Length : 771 bp
Strand : -
Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110

DNA sequence :
ATGAATAACGATGTTTTCCCGAATAAATTCAAAGCCGCACTGGCTGCGAAACAGGTACAAATTGGTTGCTGGTCAGCTCT
CTCTAACCCGATTAGCACTGAAGTTCTTGGTTTGGCTGGGTTTGACTGGCTGGTGCTGGATGGTGAACATGCGCCAAACG
ATATCTCCACGTTTATTCCGCAGTTAATGGCCCTGAAAGGCAGCGCCAGCGCGCCAGTAGTGCGAGTGCCGACCAACGAG
CCGGTAATTATTAAGCGTCTTCTGGATATCGGTTTCTATAACTTCCTGATTCCTTTTGTAGAAACAAAAGAGGAAGCAGA
GCAGGCGGTGGCATCAACTCGTTACCCACCGGAAGGCATTCGCGGCGTCTCCGTTTCTCACCGCGCCAATATGTTTGGCA
CCGTGGCGGATTATTTCGCTCAGTCGAACAAGAACATCACTATTCTGGTCCAGATAGAAAGTCAGCAGGGCGTAGATAAC
GTCGATGCTATTGCCGCTACCGAAGGTGTAGACGGCATCTTCGTCGGCCCCAGCGATCTGGCTGCGGCATTAGGCCATCT
CGGCAATGCCTCGCACCCGGATGTACAAAAAGCAATTCAGCATATTTTTAACCGTGCCAGCGCGCACGGCAAACCCAGCG
GCATCCTCGCACCAGTCGAGGCTGATGCGCGTCGTTATCTGGAATGGGGCGCGACGTTTGTGGCCGTCGGCAGCGATCTC
GGCGTCTTCCGCTCTGCCACTCAGAAACTGGCTGATACCTTTAAAAAATAA

Protein sequence :
MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNE
PVIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN
VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDL
GVFRSATQKLADTFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaI AAO17185.1 HpaI Not tested tcd island Protein 2e-49 47