|
Name : LF82_477 (LF82_477) Accession : YP_002557814.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : type II secretion proteinGspI Function : - COG functional category : - COG ID : - EC number : - Position : 3132488 - 3132859 bp Length : 372 bp Strand : - Note : corresponding to LF82_p477 in publication : Miquel et al., PLoS One; 536; 55989; APEC_01; E24377A; ED1a; HS; IAI1; IAI39; E2348; S88; SE11; SMS_3_5; UMN026; UTI89 DNA sequence : ATGAAGCGTGGATTTACCTTGCTGGAAGTAATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT TGCCAGCGGTGCGCTGAGTAATCAGCAAATCCTTGAGGAAAAAACGGTAGCGGGTTGGGTAGCTGAAAATCAGACCGCGC TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG CGAACCACACCGCTGAATACCGGTAACGTGCTGCTCCAGGCGGTGGATATTGAAGTCAGTCTTCATGACGACTTTTCGCC AGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGGCAACAGTGA Protein sequence : MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW RTTPLNTGNVLLQAVDIEVSLHDDFSPVIQSRRAWFSAVGGQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspI | YP_854402.1 | type II secretion protein GspI | Not tested | PAI I APEC-O1 | Protein | 2e-42 | 98 |
| gspI | CAE85229.1 | GspI, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-42 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LF82_477 | YP_002557814.1 | type II secretion proteinGspI | VFG2052 | Protein | 6e-42 | 93 |
