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Name : LF82_476 (LF82_476) Accession : YP_002557813.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : type II secretion proteinGspJ Function : - COG functional category : - COG ID : - EC number : - Position : 3131886 - 3132455 bp Length : 570 bp Strand : - Note : corresponding to LF82_p476 in publication : Miquel et al., PLoS One; 536; 55989; APEC_01; E24377A; ED1a; HS; IAI1; IAI39; E2348; S88; SE11; SMS_3_5; UMN026; UTI89 DNA sequence : ATGCTGGTGGCGATAGCCATTTTTGCCTCACTGGCACTGATGGCGCAGCAGGTGACAAACGGCGTTACACGCGTGAATAG CGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTTTGAACCACGATCTGACCCAAATGA TGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCGTTACTGGCGGGCGCTGGCGTGCTGGCGTCTGAGAGT GAAGGGATGCGTTTTGTACGTGGCGGCGTGGTTAATCCGTTGATGCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTA CCGCATTCATGGTGGTTATCTCGAACGGTTAGCCTGGCCACTGACCGATGCGGCAGGCAGCGTGAAGCCAACAATGCAAA AATTAATCCCGGCGGATTCGCTCCGTTTGCAGTTCTACGACGGCACGCGCTGGCAGGAGAGCTGGTCATCAGTGCAGGCG ATTCCTGTGGCAGTACGCATAACCCTGCATTCGCCACAATGGGGCGAAATTGAACGCATCTGGTTGTTACGCGGGCCGCA ATTATCATGA Protein sequence : MLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLNHDLTQMMPRPVRGDQGQREPALLAGAGVLASES EGMRFVRGGVVNPLMRLPRSNLLTVGYRIHGGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDGTRWQESWSSVQA IPVAVRITLHSPQWGEIERIWLLRGPQLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspJ | CAE85228.1 | GspJ, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-85 | 99 |
| gspJ | YP_854401.1 | type II secretion protein GspJ | Not tested | PAI I APEC-O1 | Protein | 2e-83 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LF82_476 | YP_002557813.1 | type II secretion proteinGspJ | VFG2053 | Protein | 1e-84 | 98 |
