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Name : LF82_475 (LF82_475) Accession : YP_002557812.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3130912 - 3131889 bp Length : 978 bp Strand : - Note : corresponding to LF82_p475 in publication : Miquel et al., PLoS One; 536; 55989; APEC_01; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348; S88; SE11; SMS_3_5; UMN026; UTI89 DNA sequence : ATGATCACCTTACCACCAAAACGCGGAATGGCACTGGTCGTGGTGCTGGTATTGCTGGCGGTTATGATGCTGGTGACCAT CACGCTTTCCGGGCGGATGCAGCAACAACTTGGGCGAACGCGCAGCCAGCAGGAGTACCAGCAGGCGCTGTGGTACAGCG CCAGTGCAGAAAGCCTGGCGCTGAGCGCGCTCAGTCTGAGCCTGAAAAATGAAAAGCGTGTGCATCTGGCACAACCGTGG GCTTCTGGCCCGCGTTTTTTCCCACTGCCGCAGGGGCAAATCGCCGTCACTCTGCGTGACGCACAGGCCTGCTTTAACCT GAATGCCCTCGCTCAGCCGACGACGGCGTCGCGTCCGCTCGCGGTACAACAACTGATTGCCCTGATCTCGCGCCTTGATG TACCTGCTTATCGGGCCGAACTGATAGCCGAAAGCCTGTGGGAGTTTATTGACGAAGACCGCAGCGTGCAGACGCGTCTG GGTCGTGAAGACAGCGAGTATCTCGCCCGCTCGGTGCCGTTCTACGCCGCTAATCAACCGCTGGCTGATATCAGCGAGAT GCGCGTGGTGCAGGGAATGGACGCCGGGCTTTATCAAAAACTGAAACCGTTGGTCTGTGCGCTGCCGATGACCCGCCAGC AAATCAACATCAACACCCTGGACGTCACGCAAAGCGTGATTCTTGAGGCGCTGTTTGACCCGTGGTTAAACCCTGTACAG GCGCGGGCGTTATTACAACAACGTCCGGCGAAGGGCTGGGAAGATGTCGAGCAGTTTCTTGCACAGCCGCTACTTGCTGA CGTCGATGAGCGTACTAAAAAACAGCTAAAAACCGTCCTGAGCGTGGACAGCAATTACTTCTGGCTGCGTTCAGATATCA CCGTGAATGAGATTGAACTGACGATGAATTCGTTAATTGTCCGCATGGGCCCACAACACTTTTCTGTTCTCTGGCATCAG ACAGGAGAAAGTGAGTGA Protein sequence : MITLPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQEYQQALWYSASAESLALSALSLSLKNEKRVHLAQPW ASGPRFFPLPQGQIAVTLRDAQACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMTRQQININTLDVTQSVILEALFDPWLNPVQ ARALLQQRPAKGWEDVEQFLAQPLLADVDERTKKQLKTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQ TGESE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspK | YP_854400.1 | type II secretion protein GspK | Not tested | PAI I APEC-O1 | Protein | 5e-126 | 99 |
| gspK | CAE85227.1 | GspK, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-126 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LF82_475 | YP_002557812.1 | hypothetical protein | VFG2054 | Protein | 1e-125 | 98 |
