|
Name : yghD (LF82_3199) Accession : YP_002557810.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : general secretion pathway protein M-type yghD Function : - COG functional category : - COG ID : - EC number : - Position : 3129199 - 3129735 bp Length : 537 bp Strand : - Note : 536; 55989; APEC_01; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110 DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGACACA ACACCTGGCGGGGCGTTCTCCGCGTGAAAAAGGCATGTTACTGGCAGCGGTAGTGTTCCTGTTTAGCGCCGGATATTACG TTCTCATCTGGCAGCCGTTGAGCGAACGGATTGAGCAACAGGAGACGATGTTGCAGCAGCTGGTGGCGATGAACGCGCGA CTGAAGAGCGCCGCGCCGGATATTATTGCGGCGCGAAAATCCGGCACGACAACGCCAGCACAGGTATCGCGGGTCATCAG CGACAGTGCTTCGGCGCATTCAGTGGTCATTAAGCGAATAGCCGAGCGCGGGGAGAATATCCAGGTCTGGATAGATCCGG TGGTGTTTAATGACCTGCTGAACTGGTTAAACGCGCTGGATGAAAAGTACGCGCTGCGGGTGATACAAATTGATGTCAGC GCAGGTGAGAAGCCTGGGATGGTGAATGTGCAGCGACTGGAATTTGGACGGGGGTAG Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLTQHLAGRSPREKGMLLAAVVFLFSAGYYVLIWQPLSERIEQQETMLQQLVAMNAR LKSAAPDIIAARKSGTTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVIQIDVS AGEKPGMVNVQRLEFGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-79 | 99 |
| gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 2e-77 | 95 |
| yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 6e-78 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghD | YP_002557810.1 | general secretion pathway protein M-type yghD | VFG2056 | Protein | 4e-57 | 93 |
