|
Name : LF82_474 (LF82_474) Accession : YP_002557809.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : KpsM protein Function : - COG functional category : - COG ID : - EC number : - Position : 3127250 - 3128026 bp Length : 777 bp Strand : - Note : corresponding to LF82_p474 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; ED1a; IAI39; S88; SMS_3_5; UMN026; UTI89 DNA sequence : ATGGCAAGAAGTGGATTTGAAGTCCAGAAAGTCACCGTAGAGGCATTATTTCTACGAGAAATACGAACACGCTTTGGTAA GTTCCGTCTAGGATATCTGTGGGCGATTCTCGAACCCTCTGCGCATTTGCTGATACTGTTGGGCATTTTTGGTTACATTA TGCACCGCACGATGCCAGACATCTCATTCCCGGTGTTTTTACTTAATGGCCTGATTCCCTTTTTTATCTTTAGCAGTATC AGCAAACGTTCTATTGGTGCTATTGAAGCGAACCAGGGGTTGTTTAATTATCGACCAGTAAAACCCATCGATACGATCAT TGCACGAGCACTGCTTGAGACACTGATTTACGTTGCTGTTTATATATTGCTTATGCTTATCGTCTGGATGGCAGGCGAAT ATTTCGAAATAACAAACTTTTTACAACTTGTGCTCACCTGGAGTTTGTTAATCATTCTTTCATGTGGCGTCGGCTTAATA TTCATGGTCGTTGGTAAAACCTTCCCCGAAATGCAAAAGGTCCTGCCGATACTGCTTAAGCCGCTGTATTTCATCTCCTG CATCATGTTCCCTTTACACTCGATTCCAAAGCAATACTGGTCATATCTACTCTGGAACCCATTAGTGCATGTCGTAGAGT TAAGCCGCGAGGCAGTTATGCCTGGCTATATCAGCGAAGGCGTGAGTCTGAACTACCTTGCAATGTTTACTCTGGTCACC CTGTTCATCGGCCTGGCATTATACCGAACGCGTGAAGAGGCAATGCTGACATCATGA Protein sequence : MARSGFEVQKVTVEALFLREIRTRFGKFRLGYLWAILEPSAHLLILLGIFGYIMHRTMPDISFPVFLLNGLIPFFIFSSI SKRSIGAIEANQGLFNYRPVKPIDTIIARALLETLIYVAVYILLMLIVWMAGEYFEITNFLQLVLTWSLLIILSCGVGLI FMVVGKTFPEMQKVLPILLKPLYFISCIMFPLHSIPKQYWSYLLWNPLVHVVELSREAVMPGYISEGVSLNYLAMFTLVT LFIGLALYRTREEAMLTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsM | YP_854397.1 | polysialic acid transport protein KpsM | Not tested | PAI I APEC-O1 | Protein | 6e-108 | 99 |
| kpsM | CAE85224.1 | KpsM protein | Virulence | PAI V 536 | Protein | 8e-82 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LF82_474 | YP_002557809.1 | KpsM protein | VFG1450 | Protein | 3e-108 | 99 |
