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Name : LF82_466 (LF82_466) Accession : YP_002557801.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : KpsS protein Function : - COG functional category : - COG ID : - EC number : - Position : 3118156 - 3119415 bp Length : 1260 bp Strand : + Note : corresponding to LF82_p466 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; ED1a; IAI39; S88; SMS_3_5; UMN026; UTI89 DNA sequence : ATGCAAGGCAACGCACTAACTATTTTATTATCGGGTAAAAAATATCTGCTATTGCAGGGACCGATGGGACCTTTTTTCAA CGACGTTGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGTGATCGTTTTTACTGCC GCAATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGTTGGTTGCGAGATCTCCACCGGCAATATGAC TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCATAAAGAAGCAAAACGCTGGGCAACGTCGAAAGGGATCCG CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG AAACGCATTGGCCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA ATCATTTTCCCCCTGGTATGAAGCTCGTTGCTGGGTTCGTGCGTACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA AAGTATTGCCGCGGTTAATGAATGAGCTGGATCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT CGTAACCACAGCAATTATAACGATGTGCGAGATTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCAAAAGA CAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGATTGAGTAAGG AATATGGCTTAGATGAGCGAGTCATTTATGTGCACGATCTCCCGATGCCGGAATTATTACGCCATGCAAAAGCGGTAGTG ACGATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT CAAAGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT TTCGTGGGTATTTATTGGTTAAGACGCAGGTTAATGGGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAACTGGAT AAAGATTTTCGGAATTTTTCGCATCAAGTAGGAAATACAAAAGCAAATAATACAGAATAG Protein sequence : MQGNALTILLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRNRQYLAYYQTPKEFPGWLRDLHRQYD FDTILCFGDCRPLHKEAKRWATSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI RNHSNYNDVRDYINEVMYSFSRKAPKDSYLVIKHHPMDRGHRLYRPLIKRLSKEYGLDERVIYVHDLPMPELLRHAKAVV TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGEMIFNKIKLD KDFRNFSHQVGNTKANNTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsS | YP_854344.1 | polysialic acid capsule synthesis protein KpsS | Not tested | PAI I APEC-O1 | Protein | 0.0 | 98 |
| kpsS | AAZ04471.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 98 |
