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Name : LF82_462 (LF82_462) Accession : YP_002557797.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : Polysialic acid capsule synthesis protein KpsE, Capsule polysaccharide export inner-membrane protein kpsE Function : - COG functional category : - COG ID : - EC number : - Position : 3112499 - 3113647 bp Length : 1149 bp Strand : + Note : corresponding to LF82_p462 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; ED1a; IAI39, S88; SMS_3_5; UMN026; UTI89 DNA sequence : ATGTTGATAAAAGTGAAGTCTGCCGTATCCTGGATGCGTGCTCGTCTGTCTGCCATCTCACTGGCAGATATCCAAAAACA CCTGGCGAAAATCATCATTCTGGCACCGATGGCGGTGCTGCTGATCTATCTGGCTATCTTCAGCCAGCCTCGCTATATGA GCGAGTCGAAAGTCGCCATTAAACGCTCGGATGATTTAAACAGCGGCAGCCTGAATTTTGGTCTGCTTCTGGGTGCCTCT AACCCCAGTTCCGCAGAAGATGCGTTGTATCTGAAAGAGTACATCAACTCGCCGGATATGCTGGCGGCGCTGGATAAGCA ACTAAATTTTCGTGAAGCGTTTAGCCACAGCGGGCTCGATTTTCTTAATCATCTTAGCAAGGATGAAACCGCAGAAGGCT TCCTGAAGTACTACAAGGACCGTATCAACGTCTCGTATGACGATAAAACCGGATTACTGAATATTCAGACGCAGGGCTTT AGCCCGGAGTTTGCGCTTAAGTTTAACCAAACCGTGCTGAAAGAGTCAGAGCGCTTTATCAATGAGATGTCACATCGCAT CGCGCGTGACCAGCTTGCCTTTGCAGAAACGGAGATGGAAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGC TCTCTTATCAGGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTCAATACGCTGATG GGCCAGAAGATCCAGATGGAAGCGGATCTGCGTAACTTGCTGACGTATCTGCGTGAGGACGCCCCGCAAGTAGTGAGTGC GCGTAATGCGATTCAGTCATTGCAGGCACAAATCGATGAAGAACAAAGCAAAATCACTGCGCCACAGGGTGACAAGCTAA ACCGTATGGCAGTGGATTTTGAAGAAATCAAATCAAAAGTAGAGTTCAACACCGAGCTGTACAAACTGACCCTGACCTCC ATTGAAAAGACCCGTGTAGAAGCGGCTCGTAAGCTCAAGGTGCTGTCAGTGATCAGTTCGCCACAGTTGCCGCAGGAATC GTCTTTTCCAAATATCCCTTATTTGATCGCCTGCTGGTTACTGGTGTGCTGCCTGCTGTTCGGCACCCTGAAACTGTTGC TGGCTGTTATTGAAGATCACCGAGACTAA Protein sequence : MLIKVKSAVSWMRARLSAISLADIQKHLAKIIILAPMAVLLIYLAIFSQPRYMSESKVAIKRSDDLNSGSLNFGLLLGAS NPSSAEDALYLKEYINSPDMLAALDKQLNFREAFSHSGLDFLNHLSKDETAEGFLKYYKDRINVSYDDKTGLLNIQTQGF SPEFALKFNQTVLKESERFINEMSHRIARDQLAFAETEMEKARQRLDASKAELLSYQDNNNVLDPQAQAQAASTLVNTLM GQKIQMEADLRNLLTYLREDAPQVVSARNAIQSLQAQIDEEQSKITAPQGDKLNRMAVDFEEIKSKVEFNTELYKLTLTS IEKTRVEAARKLKVLSVISSPQLPQESSFPNIPYLIACWLLVCCLLFGTLKLLLAVIEDHRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsE | YP_854330.1 | polysialic acid transport protein KpsE | Not tested | PAI I APEC-O1 | Protein | 8e-156 | 99 |
| kpsE | CAE85211.1 | KpsE protein | Virulence | PAI V 536 | Protein | 4e-155 | 99 |
| kpsE | AAZ04467.1 | polysialic acid export protein | Virulence | PAI I APEC-O1 | Protein | 6e-156 | 99 |
