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Name : LF82_427 (LF82_427) Accession : YP_002557640.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2926965 - 2928503 bp Length : 1539 bp Strand : + Note : corresponding to LF82_p427 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; E24377A; S88; UTI89 DNA sequence : ATGTCTGTACAACAAGAACATGCCACCTCTGAAACTGCAACACTCACCACCACTGAGTCCGGCGGCGTTTATCAGTCCCT GTTCGATAAAATTAATTTAACCCCGGTGTCTTCCATTCAGGAAATCGATTTATGGCAAAACAGCGAAACGCTGGCCGATG CCTCACCCGATGAGCGCGTGACGGCGGCGATTCACGTTCTGCTTTCCTGTCTGGCGAAATCAGGCGAGGACGTGGTTAAG CTCGACAAGAGCCTGCTGGATTTTCATATCGACGATCTGGATCAGAAAATCAGTAAACAGCTTGATGCGGTCATGCACCA CCCTGAATTCCAGAAAGTCGAGTCGCTGTGGCGTGGTACATGGTTCGTCGTACAGCGCACTGATTTTCGCAAAAATGTCA GAATTGAACTGCTGGATATCAGTAAAGAACATCTGCGGCAGGACTTTGATGATTCTCCGGAAATCATTCAAAGTGGTTTA TATCGCCATACATACATTCAGGAGTACGATACGCCGGGTGGCGAACCTGTTGCCTCATTAATTTCCAGCTATGAATTTGA TAACAGCCCGCAGGATATTGCCCTGCTGCGTAATATTTCCAGAGTGTCTGCCGCTTCCCATATGCCTTTTATCGGTTCTG TCGGACCGAAATTCTTCCTTAAAAATTCGATGGAAGAAGTCGCCGCGATTAAAGATATCGGCAACTACTTTAACCGCGCA GAATATATTAAATGGAAGTCGTTCCGCGATACGGATGACAGCCGCTATGTGGGATTAGTGATGCCGCGCGTGCTGGGCCG TCTGCCCTATGGGCCGGACACGGTGCCGGTACGCAGCTTTAACTATGTGGAAGAAGTCAAAGGCCCGGATCACGAAAAAT ACCTGTGGACAAACGCCTCGTTCGCCTTTGCCGCCAATATGGTGAAGAGCTTTGTGAATAATGGCTGGTGCGTGCAGATC CGTGGTCCACAGGCAGGTGGCGCAGTGGCCGATCTGCCCATCCATCTTTACGATCTCGGCACCGGCAATCAGGTCAAAAT TCCGTCCGAAGTGATGATCCCGGAAACCCGCGAATTTGAATTTGCCAACCTTGGCTTTATTCCGCTCTCTTATTATAAGA ATCGCGATTACGCCTGCTTCTTCTCGGCGAACTCTGCCCAGAAACCGGCGTTGTACGATACCGCTGACGCCACCGCCAAC AGCCGTATCAATGCCCGTCTGCCTTACATCTTCCTGCTGTCCCGCATTGCGCATTACCTGAAAATTATTCAGCGCGAGAA TATCGGCACCACCAAAGACCGCCGCGTGCTGGAACTGGAGCTGAATACCTGGATCCGCACGCTGGTGACGGAGATGACCG ATCCTGGCGATGAACTTCAGGCTTCGCATCCACTGCGCGACGGGAAAGTTATCGTCGAGGACATAGAGGACAATCCGGGC TTCTTCCGCGTCAGACTCTTTGCCGTGCCGCATTTCCAGATCGAAGGGATGGACGTCAACCTTTCTCTGGTTTCCCAGAT GCCAAAAGCAAAAGCCTGA Protein sequence : MSVQQEHATSETATLTTTESGGVYQSLFDKINLTPVSSIQEIDLWQNSETLADASPDERVTAAIHVLLSCLAKSGEDVVK LDKSLLDFHIDDLDQKISKQLDAVMHHPEFQKVESLWRGTWFVVQRTDFRKNVRIELLDISKEHLRQDFDDSPEIIQSGL YRHTYIQEYDTPGGEPVASLISSYEFDNSPQDIALLRNISRVSAASHMPFIGSVGPKFFLKNSMEEVAAIKDIGNYFNRA EYIKWKSFRDTDDSRYVGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNASFAFAANMVKSFVNNGWCVQI RGPQAGGAVADLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATAN SRINARLPYIFLLSRIAHYLKIIQRENIGTTKDRRVLELELNTWIRTLVTEMTDPGDELQASHPLRDGKVIVEDIEDNPG FFRVRLFAVPHFQIEGMDVNLSLVSQMPKAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-98 | 43 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 3e-98 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LF82_427 | YP_002557640.1 | hypothetical protein | VFG2093 | Protein | 3e-103 | 44 |
| LF82_427 | YP_002557640.1 | hypothetical protein | VFG2475 | Protein | 2e-107 | 44 |
| LF82_427 | YP_002557640.1 | hypothetical protein | VFG2070 | Protein | 1e-86 | 42 |
