Gene Information

Name : nrdE (LF82_1514)
Accession : YP_002557509.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase 2 alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2784306 - 2786411 bp
Length : 2106 bp
Strand : +
Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110

DNA sequence :
ATGGATTATCACGCTCTGAATGCGATGCTTAACCTTTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACAGCCAGGC
AGTAGACGCCTTTATGACGACGCATGTGCGTCCGAACAGTGTGGCCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGG
TTAACGAAGGTTACTATGATGAAAGTGTCCTTAATCGCTACTCTCGCGATTTTGTCATTACGCTGTTTGCCCACGCGCAC
GCCAGCGGTTTTCGTTTCCAGACATTCCTAGGAGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAA
GCGTTATCTGGAAGATTTTGCCGATCGCGTCACGATGGTGGCGCTGACGCTGGCACAAGGCGATGAAACACTGGCGACGC
AGCTCACTGATGAGATGCTGTCAGGACGCTTTCAGCCAGCCACGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGC
GAACTGGTTTCCTGTTTTCTGCTGCGTATTGAAGACAATATGGAGTCGATTGGCCGGGCAGTAAATTCCGCACTACAACT
GTCGAAACGCGGCGGCGGCGTAGCATTTTTGCTGTCGAATCTGCGGGAAGCGGGCGCGCCAATTAAACGTATTGAAAATC
AATCTTCTGGCGTGATTCCGGTGATGAAAATGCTGGAAGACGCATTTTCCTATGCCAACCAACTCGGCGCGCGTCAGGGG
GCTGGGGCAGTCTATTTACATGCTCATCATCCCGATATTCTGCGTTTTCTCGATACAAAACGGGAAAATGCCGACGAAAA
AATCCGCATTAAAACACTGTCGCTGGGCGTGGTGATCCCGGATATCACTTTCCATCTGGCAAAAGAGAATGCGCAGATGG
CGCTGTTTTCGCCCTATGACGTAGAGCGAGTTTATAGCAAGCCGTTTGCCGATGTCGCCATCAGTGAACACTATGACGAA
CTGGTTGCCGATGAACGCATCCGCAAAAAATACCTCAACGCCCGTGATTTCTTCCAGCGACTGGCAGAAATCCAGTTTGA
GTCTGGCTATCCGTACATCATGTATGAAGACACGGTTAACCGTGCTAACCCTATCGCCGGGCGCATAAATATGAGCAATC
TCTGCTCAGAAATTTTGCAGGTTAACAGCGCCTCAGAATATGACGAGAATCTCGACTATGCTCGTACAGGACATGATATT
TCCTGCAATCTAGGGTCGTTGAATATTGCCCACACCATGGATTCCCCCGACTTTGCCCGCACGGTAGAGACTGCCGTACG
CGGTTTAACGGCGGTGTCAGATATGAGTCATATCCGCAGCGTGCCGTCCATCGAAGCCGGAAATGCCGCCTCACACGCCA
TCGGTCTGGGGCAGATGAATTTACACGGTTATCTGGCACGAGAAGGCATCGCTTATGGGTCGCCGGAAGCACTGGATTTC
ACCAATCTCTATTTCTATACCATCACCTGGCACGCACTGCGTACCTCGATGTTGCTGGCGCGCGAACGCGGTGAAACCTT
CGCCGGGTTCAAACAGTCACGCTATGCCAGTGGTGAATATTTCAGCCAATATCTGCAAGGTAACTGGCAGCCGAAAACGG
CGAAAGTTGGCGAACTGTTTGCCCGTAGCGGTATTACGTTACCTACCCGTGAGATGTGGGCGCAGCTGCGCGACGACGTG
ATGCGCTATGGCATATACAACCAGAATCTCCAGGCGGTGCCGCCAACCGGTTCTATCTCTTATATCAACCATGCCACGTC
GAGTATTCATCCGATTGTGGCGAAAGTAGAGATACGCAAAGAGGGCAAAACAGGACGCGTTTACTACCCTGCCCCGTTTA
TGACTAACGAAAATCTGGCGCTGTATCAGGACGCTTACGAAATCGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCG
ACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCTGTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCA
GATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATTCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTG
AAGGCTGCGTCTCCTGTGCACTTTAA

Protein sequence :
MDYHALNAMLNLYDSAGRIQFDKDSQAVDAFMTTHVRPNSVAFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAHAH
ASGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLATQLTDEMLSGRFQPATPTFLNCGKQQRG
ELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG
AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYSKPFADVAISEHYDE
LVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYARTGHDI
SCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF
TNLYFYTITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMWAQLRDDV
MRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEA
TRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 72