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Name : LF82_403 (LF82_403) Accession : YP_002557478.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : capsid scaffolding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2754759 - 2755586 bp Length : 828 bp Strand : - Note : corresponding to LF82_p403 in publication : Miquel et al., PLoS One; ATC8739; CFT073; ED1a; HS; IAI39; E2348, S88 DNA sequence : GTGAAAGCAAAGCGTTTTCGCATCGGGGTGGAAGGTGCCACTACCGACGGACGCGAAATCCAGCGTGAATGGCTGGAACA GATGGCAGCCAGCTACAACCCGGCGGTGTATACCGCGCTGATTAACCTTGAGCACATTAAGTCTTATCTGCCGGACAGCA CGTTTAACCGCTACGGCAAGGTGACGGCGCTGTTTGCTGAAGAAATCGCGGAAGGTCCGCTGGCAGGCAAGATGGCACTG TATGCCGACGTTGAGCCAACGGAGTCCCTGGTGGAACTGGTGAAAAAAGGCCAGAAATTATTCACCTCTATGGAAGTCAG CCCGAAGTTTGCTGATACGGGCAAAGCCTACCTGGTCGGCCTGGCTGCCACTGATGATCCCGCCAGTCTGGGTACGGAAA TGCTGACATTCAGCGCCAGTGCAGCCCATAACCCGCTGGCAAACCGCAAGCAGAATCCTGCCAATCTTTTTACCGCTGCA GAGGAAACGGTGATCGAACTGGAAGAAATCCAGGAGGACAAGCCGTCCCTGTTTGCCCGCGTCACGGCGCTGTTTACCAA AAAAGAGCAGTCCGATGACGTCCGGTTCTCTGATGTGCATAAGGCCGTGGAACTGGTCGCCACTGAGCAGCAGAACCTGA GCACGCGCACCGAAAAATCCCTGTCTGAGCAGGAAGAACGCCTGTCTGAGCTGGAGACTGCTCTGCAGGAGCAGCAAACC GCCTTTAACGAACTGGTGGATAAGCTGAGTCATGAAGACAGCCGCCAGGACTACCGCCAGCGTGCAACAGGCGGCAACGC CCCCGCTGACACTCTGACCAATTGCTGA Protein sequence : MKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALINLEHIKSYLPDSTFNRYGKVTALFAEEIAEGPLAGKMAL YADVEPTESLVELVKKGQKLFTSMEVSPKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFTAA EETVIELEEIQEDKPSLFARVTALFTKKEQSDDVRFSDVHKAVELVATEQQNLSTRTEKSLSEQEERLSELETALQEQQT AFNELVDKLSHEDSRQDYRQRATGGNAPADTLTNC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4626 | NP_458708.1 | putative capsid protein | Not tested | SPI-7 | Protein | 2e-98 | 85 |
| t4320 | NP_807915.1 | capsid protein | Not tested | SPI-7 | Protein | 2e-98 | 85 |
| unnamed | ABR13465.1 | putative capsid scaffold | Not tested | PAGI-6 | Protein | 9e-43 | 47 |
