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Name : LF82_400 (LF82_400) Accession : YP_002557475.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : capsid completion protein Function : - COG functional category : - COG ID : - EC number : - Position : 2752470 - 2752997 bp Length : 528 bp Strand : - Note : corresponding to LF82_p400 in publication : Miquel et al., PLoS One; ATC8739; CFT073; ED1a; HS; IAI39; E2348, S88 DNA sequence : GTGGCGAAAGGCACTGCCACATCAAAACCCCGTCCACCGCCCTTTATTTCAGGAGAAAGCAGCATGAAGTTTGTTGCGCC AGAACAGGCACCGGAACAGGCGGAAATCATCAGAAATACGCCGTTCTGGCCTGATGTGGACCTGTCGGAGTTTCGCAGTG TCATGCGCACTGACGGCACGGTGACGCAGCCGCGTTTAAAGCAGGTTGCGCTGTCGGCAATTTCGGAGGTCAACGCAGAG CTGTATGAGTTTCGCAGACGCCAGCAGATGCTGGGGTATGCCTCGCTGGCAGAAGTCCCGGCGGAACAACTGGACGGCAA AAGCGAGCGCATTCAGCACTATTTCAACGCGGTTTACTGCTGGGCACGCGCCATGCTCAACGAACGTTACCAGGACTATG ACGCCACGGCATCCGGTGCGAAGCGAGGCGAGGAACTGGCGGAAGCAAGCGGTGATTTATGGCGTGACGCCCGCTGGGCC ATCAGCCGGGTGCAGGATGCGCCGCACTGCACAGTGGAGCTTATCTGA Protein sequence : MAKGTATSKPRPPPFISGESSMKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPRLKQVALSAISEVNAE LYEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYCWARAMLNERYQDYDATASGAKRGEELAEASGDLWRDARWA ISRVQDAPHCTVELI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t4317 | NP_807912.1 | capsid completion protein | Not tested | SPI-7 | Protein | 8e-63 | 90 |
| STY4623 | NP_458705.1 | putative capsid completion protein | Not tested | SPI-7 | Protein | 2e-62 | 89 |
