Gene Information

Name : LF82_390 (LF82_390)
Accession : YP_002557465.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : phage tail protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2747096 - 2747701 bp
Length : 606 bp
Strand : -
Note : corresponding to LF82_p390 in publication : Miquel et al., PLoS One; ATC8739; CFT073; ED1a; HS; IAI39; E2348, S88

DNA sequence :
ATGAATAGTCTGCTGCCACCGGGTTCAACTTCACTGGAGCGCCGACTGGCGCAAACCTGTAGCGGGATTTCTGATCTGCA
GGTGCCGCTGCGTGACTTGTGGAATCCGGCTACCTGTCCGGTCAGCTTCCTGCCTTATCTCGCCTGGGCGTTCTCTGTGG
ATCGCTGGGACGAGGGCTGGACAGAAAGCGTCAAACGCCAGGTAGTGAAGGATGCTTTTTATATTCATCAGCATAAAGGA
ACTACCAGTGCCGTGCGGCGGGTGGTGGAACCGTTCGGATTCCTGATCCGCATTATTGAGTGGTGGCAGACCGGAGAAAC
ACCGGGCACGTTTCGCCTGGATATCGGCGTGCAGGACCAGGGCATCACTGAAGATACCTATCTGGAACTTGAGCGGCTGA
TAAGCGATGCCAAACCATGTAGCCGTCACATGATCGGCATGTCCATCAATCTGCAGACCAGCGGTCCGCATTGGGTGGGG
GCCGCCAGCTATCTTGGCGAAGAAATCACGATCTATCCGTATATCAACGAAACAATTATTTCCGGCGGCACCGCGCATGA
AGGCGGGGCGGTCCATGTTATTGACACAATGAGAGTGAATCCATGA

Protein sequence :
MNSLLPPGSTSLERRLAQTCSGISDLQVPLRDLWNPATCPVSFLPYLAWAFSVDRWDEGWTESVKRQVVKDAFYIHQHKG
TTSAVRRVVEPFGFLIRIIEWWQTGETPGTFRLDIGVQDQGITEDTYLELERLISDAKPCSRHMIGMSINLQTSGPHWVG
AASYLGEEITIYPYINETIISGGTAHEGGAVHVIDTMRVNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4306 NP_807902.1 phage tail protein Not tested SPI-7 Protein 2e-91 99
STY4612 NP_458694.1 putative phage tail protein Not tested SPI-7 Protein 2e-91 99
unnamed ABR13481.1 hypothetical protein Not tested PAGI-6 Protein 8e-42 52