Gene Information

Name : LF82_384 (LF82_384)
Accession : YP_002557459.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : phage tail protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2741688 - 2741990 bp
Length : 303 bp
Strand : -
Note : corresponding to LF82_p384 in publication : Miquel et al., PLoS One; ATC8739; CFT073; ED1a; HS; IAI39; E2348, S88

DNA sequence :
ATGAGCGATAAGCAGACTGAAAAGACTATTCAACTGGATACCCCCATCAAGCGCGGTAAAACAGAAATCACCGAAATTGT
GCTGCGTAAACCGCAGTCCGGTGCGCTGCGCGGTACACGCCTGCAGGCCATTATGGATATGGATGTGAACGCGATGATGA
CCGTGATCCCCCGTATCTCCAGTCCGGCACTGACTGCACAGGAAATTGCAGAGATGGACCCGGCAGATCTCACTGCCATG
TCGGTTGAGGTTGTCACTTTTTTGTTGAAGAAGTCGGTGCTTGCCGGTTTACCGACAGCCTGA

Protein sequence :
MSDKQTEKTIQLDTPIKRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAM
SVEVVTFLLKKSVLAGLPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4605 NP_458688.1 putative phage tail protein Not tested SPI-7 Protein 2e-36 88
t4299 NP_807896.1 phage tail protein Not tested SPI-7 Protein 2e-36 88
unnamed ABR13486.1 putative phage tail protein Not tested PAGI-6 Protein 5e-12 47