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Name : LF82_029 (LF82_029) Accession : YP_002555192.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 263447 - 265789 bp Length : 2343 bp Strand : + Note : corresponding to LF82_p029 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; ED1a; S88; UMN026; UTI89 DNA sequence : ATGTCCTTAAAAGGTCTTCGCTTTACGCTGGAGGTTGACGGCCAGGAGCCGGACACCTTTGCAGTGGTGAATTTCAGGTT AATCCAGAACCAGTCTTATCCGTTTGTGATGAGTGTGGATGTCGCCAGCGATTCTTTTATGCAGACGGCGGAGATGCTGC TGGAGAAGAAGGCAACGCTGACCATCTGGCAGGGCGTCATCCCGCAGCGTTATGTCACAGGCGTGGTGGCAGGGTTTGGT ATGCAGGAGAACAACGGCTGGCAGATGCGTTATCACCTGCGTATTGAGCCGCCGTTATGGCGGTGCGGGCTGCGGCAGAA CTTCCGCATCTTCCAGCAGCAGGATATCCGGACGATATCGGCCACGTTACTGAACGAGAACGGCGTCACAGAGTGGACGC CGCTGTTTTATGAGGACCATCCGGCGCGGGAGTTCTGTGTGCAGTACGGGGAGTCGGACCTGGCGTTTCTGGCGCGGCTG TGGGCGGAGGAGGGGATTTTCTTCTTTGAGCGGTTTGCGGCGGACAGTCCGGAGCAGAAGCTGACGCTGTGCGACGATGT GGCGGGGCTGTCACAGGCGGGGGAGTTTCCGTTTAACCCGGACACATCGGCAGGAGCGGAGACGGAGTGTGTCAGTATGT TCCGTTATGAGGCGCATGTCCGCCCGTCATCGGTGCAGAGCCAGGATTACACGTTTAAGGTGCCGGACTGGCCGGGGATG TATGAGCAGCAGGGTGAGAGCCTGAACGGACAGCTTGAACAGTATGAAATATTTGATTATCCGGGAAGGTTCAAGGATGA GCAGCACGGCAAGGATTTCACGCTGTACCGGATGGAGAGCCTGCGCAGTGATGCGGAAAAGGCCACAGGGCAGAGTAATT CGCCGAAGCTGTGGCCGGGGACGCGGTTTACGCTGACGGGGCATCCGCAGAAGATGCTGAACCGTGAATGGCAGGTGGTA CAGAGCATTCTGTCAGGAGACCAGCCGCAGGCGCTTCACGGCAGCCAGGGGAGAGGAACCACGCTGGGAAATCAGTTAGA GGTGATACCGGCAGACCGGACGTGGCGTCCACGGCTGCAAAGCAAACCGAAGGTGGACGGGCCACAGAGCGCCATTGTCA CCGGTCCTGCGGGAGAGGAAATCTTCTGCGACGAACATGGCCGGGTACGGGTGAAGTTTCACTGGGACAGGTATAACCCG GCAACGGAGGCGAGTTCGTGCTGGGTTAGGGTATCGCAGGCGTGGGCGGGGCCGGGGTTTGGTAACCTGGCGATACCGCG CGTGGGCCAGGAGGTGATTGTTGACTTCCTGAACGGGGACCCGGACCAGCCGATAATCATGGGGCGGACGTACCATGAGG ACAACCGTTCGCCGGGGAGCCTGCCGGGGACGAAGACGCAGATGACGATACGGTCGAAGACCTATAAAGGAAGCGGGTTT AACGAGCTGCGCTTTGAGGATGCGACGGATAAGGAACAGGTCTATATCCACGCGCAGAAGAACATGGACACGGAGGTACT TAACGACCGGACGACGGACGTTAAGCATGACCACACGGAAACCATTGGTAACGACCAGAAGATAACGGTGGGGTTGGGCC AGACGGTGAATGTGGGGAGCAAAAAGGAAGGTGGTCATGACCAGAAAGTGATAGTGGCGAACGACCGGTGCATCACGGTA CGTAACGACCAGATGCTGAAGGTGACGAACGACCGGACGGTGAGCGTGAGTCACGATGACAGTCTGTATGTCAGAAATGA CCGCTGGGTGACGGTGAAAGGGAAGCTGGAGCACAGGACGACGGGGAACCATATCAGCCAGGTGGAGGGGAAGCACAGCC TGGAGGTGAAGGGCGATCTGGCTGAGAAGGTGAGTGGCGCGCTGGGGATAAAGGTGGACGGGGAAATCGTGCTGGAGAGC AGCAGTCAGATAAGCCTGAAGGTGGGCAGGTCGTTCGTAGTGATACACTCGGGCGGCGTGGATATCGTCGGGCCGAAGAT AAATCTGAATGGTGGGGGGAGTCCGGGGACGCCGGTGTCAACACTTCAGCCAAGCGTGCTAGAGGTTCTGACAGATGATG AAGGTGATGATAAAGGCGAATGTGAGAAGAACCGTGACTCTGATGCTGGTTCAGGAGGCAATGACGACCAGCTGGATAAT CCTAAAAAATATTACTTACGCTTCCATTTTACAGATGATAGCAGTATTCCGTATGCGAATACTAAATATATCGCATACTT TGCAGATGGTACAAAAAGAGAAGGTATGATGGATGATGATGGGTATACAGAAGTATTTATAAAAGATATTGAAGAGGAAA TAAAAGTTCATTTGCTTATTTAA Protein sequence : MSLKGLRFTLEVDGQEPDTFAVVNFRLIQNQSYPFVMSVDVASDSFMQTAEMLLEKKATLTIWQGVIPQRYVTGVVAGFG MQENNGWQMRYHLRIEPPLWRCGLRQNFRIFQQQDIRTISATLLNENGVTEWTPLFYEDHPAREFCVQYGESDLAFLARL WAEEGIFFFERFAADSPEQKLTLCDDVAGLSQAGEFPFNPDTSAGAETECVSMFRYEAHVRPSSVQSQDYTFKVPDWPGM YEQQGESLNGQLEQYEIFDYPGRFKDEQHGKDFTLYRMESLRSDAEKATGQSNSPKLWPGTRFTLTGHPQKMLNREWQVV QSILSGDQPQALHGSQGRGTTLGNQLEVIPADRTWRPRLQSKPKVDGPQSAIVTGPAGEEIFCDEHGRVRVKFHWDRYNP ATEASSCWVRVSQAWAGPGFGNLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHEDNRSPGSLPGTKTQMTIRSKTYKGSGF NELRFEDATDKEQVYIHAQKNMDTEVLNDRTTDVKHDHTETIGNDQKITVGLGQTVNVGSKKEGGHDQKVIVANDRCITV RNDQMLKVTNDRTVSVSHDDSLYVRNDRWVTVKGKLEHRTTGNHISQVEGKHSLEVKGDLAEKVSGALGIKVDGEIVLES SSQISLKVGRSFVVIHSGGVDIVGPKINLNGGGSPGTPVSTLQPSVLEVLTDDEGDDKGECEKNRDSDAGSGGNDDQLDN PKKYYLRFHFTDDSSIPYANTKYIAYFADGTKREGMMDDDGYTEVFIKDIEEEIKVHLLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 86 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 0.0 | 86 |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 2e-131 | 49 |
