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Name : LF82_024 (LF82_024) Accession : YP_002555187.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 257715 - 259556 bp Length : 1842 bp Strand : - Note : corresponding to LF82_p024 in publication : Miquel et al., PLoS One; 536; APEC_01; ED1a; S88; UMN026; UTI89 DNA sequence : GTGGCTTTTGAAGAACGTTACTACCGCGAAGAACTGGATTATCTGCGCCAGCTTGGCAAACTGTTGGCGCAGGAAAAACC GCATCTGGCCCATTTTCTGGCCGAGAAAGAGGGTGATCCGGACGTGGAGCGTCTGATGGAAGCCTTTGCCTTTATGTCCG GTAGCCTGCGCCAGAAACTTGAGGACGAATTCCCCGAATTCACCCATGGGCTAATCCGTATGCTGTGGGCAAACTATTTA CGCCCGGTTCCGGCCATGACGGTTATTGCCTATGAACCCAAAACCGATCAGTTAAAAGTCCCTGTTCAGGTCTGTCGTAA TGAACTGATCAGAAGCCGCTCAGAAAAGTCCTCCCTGACTGCTCAGAAGGTGCTGCCTGACAATCATGATAAAATCGTTT CTTCCGTAGCCTGCCATTTCACGCTGGCGCGCGATATCTGGCTGCAACCACTGCGCATTCTCGATACCCGCAACGCCAGC AGTCTGAAAGAAGGCATCATAGATATCAGTTTTACCGCAGATAACAATGTCTCCCCCGCCATGCTTGACCTGAACAAAAT CACGTTCTGGCTGGGTAATGAAGACGATTATACCCGACACCAGCTTTATCTGTGGTTTTGCGAATGCCTGATGGATGCGG AACTGATTGCCGGAGAGCACAGCCTGCCGCTGCCGGATCTGTGGCTGGATGCTGCGGGTTTTGACAACCAGGATGCCCTG CTGCCGTGGCCGAAAAATGTCCACAGCGGCTACCGCGTGCTTCAGGAGTATTTCTGCTATCCCGAAGCCTTCTTCTTTTT CCATCTGCGCGATGTTGCGCCGCTACCAGACGATTTCCCGGTGAGTGCGTTTACGCTGCGCCTGCACTTTAACCGCCCGT TACCTGCCGACATCAAGCTGCGCCAGGATTCGCTGCGTCTGCACTGTACGCCAGCCATTAACCTGTTTACGCATTATGCG GAACCCGTCAGGCCGGATGGGCGGATGGCGGAATACCCGCTGCGCGCCAGCCATAAGCATCCGGACGCCTATGACATTTT TCAGGTCAGTACAGTCACCAGTAAAATCAAAGTGTCAGGGACTGATTCCAGCCCCGGCAGCCAGGTGCGTGTCTGGCCCG AATTTGAAAGTTTCCAGCACCAGATGGAGTACAGCCGCCAGCGGGAAGTCGTCTACTGGCATCACCGGACTAAAACGTCC CTGTTTCACTACGGGCTTGAACATAGTATCGCCTTTGTCCATGCAGACGGTAGCATTCCGGGCAGCTCACGGTTTAACGA TGACGTGATCACCACGTCATTAATCTGTACCAACCGTATGATCCCTGCCCGGCTGCATACCGGTGATATCTGCGTGGCCG TCAACAAAAATCCGGCAGTGGCCTCATTTCGTAATGTCACGCGCCCGACACAGCCGCTCTGGCCAGTCACGGACGGCGAC ATGCACTGGTCGCTGATTTCCGCGATGAACCTGAACTACCTCTCCCTGCTGGACAGGGAGACACTGATCCAGATCCTGCG GACCTTCGACCTGCCAGGCGCTCACCATCCGCAGCGGGCCAGACTGTCACGCCAGAAACTGGATGCCATAGAAAAACTCG AAACCAAACCTGTTGACAGGTTGTTTAAAGGCGTACCGGTTCGCGGGCTGGCGACCACGCTGTGGATACGTCCCGATCCG TTTATCTGCGAAGGTGAAATTTATCTTCTGGGTACCGTGCTCTCGCACTTCTTTGCCCTCTACGCCAGCATCAATTCGTA CCACTGTCTGAAAATCATTAACACGGAAAGTCAGGAGGCTTGGGAATGGCAGGAGAAAATGGGCCAGCACGCCCTGATAT AG Protein sequence : MAFEERYYREELDYLRQLGKLLAQEKPHLAHFLAEKEGDPDVERLMEAFAFMSGSLRQKLEDEFPEFTHGLIRMLWANYL RPVPAMTVIAYEPKTDQLKVPVQVCRNELIRSRSEKSSLTAQKVLPDNHDKIVSSVACHFTLARDIWLQPLRILDTRNAS SLKEGIIDISFTADNNVSPAMLDLNKITFWLGNEDDYTRHQLYLWFCECLMDAELIAGEHSLPLPDLWLDAAGFDNQDAL LPWPKNVHSGYRVLQEYFCYPEAFFFFHLRDVAPLPDDFPVSAFTLRLHFNRPLPADIKLRQDSLRLHCTPAINLFTHYA EPVRPDGRMAEYPLRASHKHPDAYDIFQVSTVTSKIKVSGTDSSPGSQVRVWPEFESFQHQMEYSRQREVVYWHHRTKTS LFHYGLEHSIAFVHADGSIPGSSRFNDDVITTSLICTNRMIPARLHTGDICVAVNKNPAVASFRNVTRPTQPLWPVTDGD MHWSLISAMNLNYLSLLDRETLIQILRTFDLPGAHHPQRARLSRQKLDAIEKLETKPVDRLFKGVPVRGLATTLWIRPDP FICEGEIYLLGTVLSHFFALYASINSYHCLKIINTESQEAWEWQEKMGQHALI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1761 | YP_851424.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LF82_024 | YP_002555187.1 | hypothetical protein | VFG2078 | Protein | 3e-116 | 41 |
