|
Name : LF82_311 (LF82_311) Accession : YP_002556870.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2054847 - 2055725 bp Length : 879 bp Strand : - Note : corresponding to LF82_p311 in publication : Miquel et al., PLoS One; LF_82 DNA sequence : ATGGGGATACTGGAGCAGGAAATGAAGCGGCTGGCGCAGCAGGCGGGCGGCAGCTACAAAACTGTGGATGACCGCATCAG GCTGGCGCAGCGGTTTTGTGAGCGTCTGGTTCTGGCGCAGAACGTACAAATCCGCCGGGTGGAACAGCTTAAGGCGCGGC ATATTGAAGGCTATGTTCGTGAACGAGTGGTGCAGGGCATCACAAAGCGTTCCCTGCAAAATGAGATGGCGGCGGTGCGC TGCATTCTGAAACAGGCCGGGCGTGACAGGCTGGCGCAGAGTGAGCGACTGAATAACCGTTCTCTTGGTCTGTCTGGCGC ATCCCGCAACGGTACGAAGCTGGCGATCACGCCGGAGCACTATCGTGACGTGCTGGAGACGGCCCGCGCAAAAGATCCGG GACTGGCGGCAGCGCTGGAACTCTCAAGGCTGATGGGATTACGTTCGCAGGAGGCGGTGCAAAGTGCGCAGTCATTAAGA ACGTGGAGGCAATCGCTGGAGCGGGGTGAGCCCCGTTTAACCGTGGTGTTCGGCACCAAAGGCGGGCGTCCGCGAGAAAC CGTTATTCTGGATGTTGTCGCTATCAGAAAAGCGCTGGATAATGCGTTGGTTGTGGCAGACGATCGCCACGGCAGGCTGA TTGATAAGTCAGATCTGAAAACCGCCATGAAATACTGGCACAGTCAGGCGTCACGTCTCGGGTTAACGGGCACATATTCC CCGCACTCGTTGCGCTATGCGTGGGCGCAGGATGCCATTCGTCATTATCTGGCGCAGGGATTTTGTGAGAAGGAAGCGCT GGCAATGACGGCGATGGATTTGGGGCACGGCGACGGGCGCGGGCGGTATGTGGCGCAGGTTTACGGAAGAAGAGATTGA Protein sequence : MGILEQEMKRLAQQAGGSYKTVDDRIRLAQRFCERLVLAQNVQIRRVEQLKARHIEGYVRERVVQGITKRSLQNEMAAVR CILKQAGRDRLAQSERLNNRSLGLSGASRNGTKLAITPEHYRDVLETARAKDPGLAAALELSRLMGLRSQEAVQSAQSLR TWRQSLERGEPRLTVVFGTKGGRPRETVILDVVAIRKALDNALVVADDRHGRLIDKSDLKTAMKYWHSQASRLGLTGTYS PHSLRYAWAQDAIRHYLAQGFCEKEALAMTAMDLGHGDGRGRYVAQVYGRRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4676 | NP_458755.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-102 | 80 |
| t4367 | NP_807960.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-102 | 80 |
| SESS1296_03610 | AFO66305.1 | putative DNA binding protein | Not tested | SESS LEE | Protein | 1e-107 | 78 |
| SESS1635_03828 | AFO66378.1 | putative DNA binding protein | Not tested | SESS LEE | Protein | 1e-107 | 78 |
| YE3461 | YP_001007623.1 | putative phage integrase | Not tested | YAPI | Protein | 6e-69 | 50 |
| PMI2564 | YP_002152283.1 | hypothetical protein | Not tested | Not named | Protein | 9e-61 | 50 |
| YpsIP31758_3697 | YP_001402651.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-66 | 48 |
| api85 | CAF28559.1 | putative integrase | Not tested | YAPI | Protein | 8e-45 | 47 |
| STY4586 | NP_458670.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-53 | 44 |
| t4280 | NP_807878.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-53 | 44 |
