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Name : LF82_310 (LF82_310) Accession : YP_002556869.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : Transposase (hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2053437 - 2053946 bp Length : 510 bp Strand : - Note : corresponding to LF82_p310 in publication : Miquel et al., PLoS One; APEC_01; CFT073; ED1a; E2348; S88; UMN026; UTI89 DNA sequence : TTGCGGTCTGGCAACTGCAAGTGTCAAACAAGAAATCAAAAGGGGGTCCCAATGGGGAACGAAAAGAGCTTAGCGCACAC CCGATTGAACTGTAAATATCACATAGTTTTTGCGCCAAAATACCGAAGACAAGTGTTCTACAGAGAGAAGCGTAGAGCAA TAGGCCGTATTTTGAGAAAGCTGTGTGAGTGGAAAAGCGTACGGATTCTTGAAGCTGAATGCTGTGCAGATCATATCCAT ATGCTTGTGGAGATCCCGCCCAAAATGAGCGTATCCGGCTTTATGGGATATCTGAAAGGGAAAAGCAGTCTGATGCTTTA CGAGCAGTTTGGTGATTTGAAATTCAAATACAGGAACAGAGAGTTCTGGTGCAGAGGGTACTACGTCGATACGGTGGGTA AGAACACGGCGAAGATACAGGATTACATAAAGCACCAGCTTGAAGAGGATAAAATGGGAGAGCAGTTATCGATTCCCTAT CCGGGCAGCCCGTTTACGGGCCGTAAGTAA Protein sequence : MRSGNCKCQTRNQKGVPMGNEKSLAHTRLNCKYHIVFAPKYRRQVFYREKRRAIGRILRKLCEWKSVRILEAECCADHIH MLVEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPY PGSPFTGRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 3e-66 | 94 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 2e-42 | 65 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 2e-45 | 62 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 2e-32 | 56 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 1e-32 | 56 |
