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Name : LF82_302 (LF82_302) Accession : YP_002556854.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2032562 - 2033662 bp Length : 1101 bp Strand : + Note : corresponding to LF82_p302 in publication : Miquel et al., PLoS One; 536; 55989; APEC_01; CFT073; ED1a; IAI39; S88; UMN026; UTI89 DNA sequence : ATGATGCCGTCCGCCTCCCCAAAACAACGCGTACTGATTGTGGGCGCCAAATTTGGCGAAATGTACCTGAATGCCTTTAT GCAGCCCCCGGAGGGGCTGGAACTGGTCGGCCTGCTGGCGCAGGGAAGCGCCCGTTCAAGAGAGCTGGCTCATGCGTTTG GCATTCCGCTGTATACCTCGCCGGAACAGATAACCAGGATGCCGGATATCGCCTGTATTGTCGTGCGTTCGACCGTCGCC GGAGGAACCGGTACGCAGCTTGCCAGACACTTTCTGACGCGCGGCGTACACGTCATTCAGGAGCATCCCCTCCACCCGGA TGACATCAGTTCCTTACAAACGCTGGCGCAGGAACAGGGCTGCTGCTATTGGGTAAACACGTTTTATCCGCATACGCGCG CGGGACGCACATGGCTTCGCGATGCGCAGCAGCTGCGTCGCTGCCTGGCTAAGACGCCGCCGGTAGTCCACGCCACCACC AGCCGACAGTTGCTCTACTCCACTCTGGATTTGTTGTTGCTGGCTCTGGGCGTTGATGCCGCCGCCGTGGAGTGCGACGT GGTTGGCAGCTTTAGCGATTTTCACTGTCTGAGACTCTTCTGGCCGGAGGGAGAAGCCTGCCTGCTGCTTCAGCGCTATC TCGATCCTGACGATCCAGATATGCATAGCCTTATCATGCACCGCCTGCTGCTGGGCTGGCCGGAAGGTCATCTTTCGCTG GAGGCGAGCTACGGCCCCGTCATCTGGTCATCCAGTCTGTATGTCGCAGACCATCAGCAGAACCCCCACAGTCTCTGGCG CAGACCGGAGATCCTGCGCGATCTGCCGGGTCTGACGCGCAGCGCGGCGCCCCTGAGCTGGCGCGACTGCTGCGAAACCG TCGGGCCGGAGGGCGTCAGCTGGTTGCTACACCAGTTGCGCAGCAATCTGGCGGGCGAACATCCACCAGCGGCCTGCCAA AGCGTACATCAGATCGCGTTATCACGTTTATGGCAGCAGGTTTTACGTAAGACCGGCAATGCGGAGATCAGACGCCTGAC GCCGCCGCACCACGACCGGTTAGCCGGTTTCTACAACGATGATGATAAGGAGGCGCTGTGA Protein sequence : MMPSASPKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITRMPDIACIVVRSTVA GGTGTQLARHFLTRGVHVIQEHPLHPDDISSLQTLAQEQGCCYWVNTFYPHTRAGRTWLRDAQQLRRCLAKTPPVVHATT SRQLLYSTLDLLLLALGVDAAAVECDVVGSFSDFHCLRLFWPEGEACLLLQRYLDPDDPDMHSLIMHRLLLGWPEGHLSL EASYGPVIWSSSLYVADHQQNPHSLWRRPEILRDLPGLTRSAAPLSWRDCCETVGPEGVSWLLHQLRSNLAGEHPPAACQ SVHQIALSRLWQQVLRKTGNAEIRRLTPPHHDRLAGFYNDDDKEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtU | NP_993005.2 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 7e-160 | 99 |
| ybtU | YP_070122.1 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 7e-160 | 99 |
| ybtU | CAA21392.1 | - | Virulence | HPI | Protein | 3e-159 | 99 |
| ybtU | YP_853077.1 | yersiniabactin biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 2e-159 | 99 |
| irp3 | YP_002346900.1 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 7e-160 | 99 |
| ybtU | NP_669708.2 | thiazolinyl-S-HMWP1 reductase | Virulence | HPI | Protein | 7e-160 | 99 |
| irp3 | YP_001006817.1 | yersiniabactin biosynthetic protein YbtU | Virulence | HPI | Protein | 3e-160 | 97 |
| irp3 | CAA73128.1 | Irp3 protein | Virulence | HPI | Protein | 9e-160 | 97 |
| nrpU | YP_002152319.1 | siderophore biosynthetic protein | Virulence | Not named | Protein | 5e-62 | 43 |
