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Name : LF82_299 (LF82_299) Accession : YP_002556851.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : Arac type regulator Function : - COG functional category : - COG ID : - EC number : - Position : 2015729 - 2016688 bp Length : 960 bp Strand : + Note : corresponding to LF82_p299 in publication : Miquel et al., PLoS One; 536; 55989; APEC_01; CFT073; ED1a; IAI39; S88; UMN026; UTI89 DNA sequence : ATGATGGAGTCACCGCAAACGCAATCTGAAATCTCTATTCACCAGTTGGTGGTCGGGAAACCTGCAAACGATGGCAATAT TCCTGCTCAGTGTGAACTGCTGCGCTGTTCGTTGCAGGAAGGTATGGATATTTTGCTCTGGAGGGGCCATTTTGCGCGGC CTGAGACGTTGCAGCTACACGACGATCTGGGCAGGATTAACTTCTCGTGCATCCTGGAAGGCACATCGCGCTTTGCGATT CAGGGACTCCGGCGCCACACCGACTGGGAGCTTGCGCGCAATCGCCATTACATTACCCATACGCCAGACTGTCGCGGCAG CGCCTCCTATTGTGGCCGATTCGAGAGCATTACCCTCTCCTTCAGCCCTGAAACCCTCGCGCTGTGGGTGCCGGATATTA GCGCGGTCATTAAGAATAAGATCGACTCCCACTGCTGTTGCCAGCAGCACCGTTGTAATGCTGAAACCCACTTAACGGCT CAGGCCTTGCGTCACGCGCTGATGCGCATGCACGGCGGCTTCAGTCATGAACAAAAGCCGTCGACGCTATGGTTGCAGGG GCAAAGTCTGGTCATGCTCAGTCTGGTGCTGGATGAACATCGCGAAGACGCCAGTTGCCTCTCCTGCCACTTCAACCCGA TGGAACGCCAGAAACTGCTGCGGGCGAAGGATCTGCTGCTGGCTGATCTGACGCAAGCGCCGGGCGTCGCGGAGCTGGCC AGAGAGTCCGGTCTGAGCGTTCTCAAAATTAAGCGAGGCTTCCGCGTTCTGTTCAACAACAGCGTCTATGGCCTGTTTCA GGCTGAACGAATGCAGGAAGCCAGAAGACGCCTGGCCAACGGCAATACCTCCGTCATGACGGTGGCGGCCGATCTGGGCT ATGCCAACGCCAGCCATTTCTCTGCCGCCTTCCAGAAACAGTTTGGCGTAACTCCTTCGACCTTTAAACGCGGGATGTAA Protein sequence : MMESPQTQSEISIHQLVVGKPANDGNIPAQCELLRCSLQEGMDILLWRGHFARPETLQLHDDLGRINFSCILEGTSRFAI QGLRRHTDWELARNRHYITHTPDCRGSASYCGRFESITLSFSPETLALWVPDISAVIKNKIDSHCCCQQHRCNAETHLTA QALRHALMRMHGGFSHEQKPSTLWLQGQSLVMLSLVLDEHREDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELA RESGLSVLKIKRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHFSAAFQKQFGVTPSTFKRGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtA | YP_002346903.1 | transcriptional regulator YbtA | Virulence | HPI | Protein | 4e-139 | 99 |
| ybtA | NP_669705.1 | AraC family transcriptional regulator | Virulence | HPI | Protein | 4e-139 | 99 |
| ybtA | NP_993008.1 | transcriptional regulator YbtA | Virulence | HPI | Protein | 4e-139 | 99 |
| ybtA | YP_070125.1 | transcriptional regulator YbtA | Virulence | HPI | Protein | 4e-139 | 99 |
| ybtA | CAA21389.1 | - | Virulence | HPI | Protein | 4e-139 | 99 |
| APECO1_1057 | YP_853074.1 | AraC family transcriptional regulator | Not tested | PAI IV APEC-O1 | Protein | 9e-140 | 99 |
| ybtA | CAB46574.1 | yersiniabactin transcriptional regulator, YbtA | Virulence | HPI | Protein | 1e-137 | 99 |
| ybtA | YP_001006814.1 | transcriptional regulator YbtA | Not tested | HPI | Protein | 1e-137 | 99 |
