|
Name : fliP (LF82_0710) Accession : YP_002556821.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein fliP Function : - COG functional category : - COG ID : - EC number : - Position : 1985898 - 1986635 bp Length : 738 bp Strand : + Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110 DNA sequence : ATGCGTCGTTTGTTTTCTGTCGCACCGGTCCTTCTCTGGCTGATTACGCCCCTCGCCTTCGCGCAACTGCCGGGTATCAC CAGCCAGCCGCTACCTGGCGGTGGACAAAGCTGGTCGCTCCCGGTGCAGACGCTGGTGTTCATCACCTCGTTGACGTTCA TTCCAGCGATTTTACTGATGATGACCAGTTTCACCCGCATCATTATTGTTTTTGGTTTATTGCGTAACGCGCTGGGAACG CCCTCCGCGCCACCTAACCAGGTATTGCTGGGGCTGGCACTGTTTTTGACCTTTTTTATTATGTCGCCAGTGATCGACAA AATTTATGTCGATGCGTACCAGCCATTCAGCGAAGAGAAAATCTCAATGCAGGAGGCGCTGGAAAAAGGGGCGCAGCCGC TGCGTGAGTTTATGCTGCGTCAGACCCGCGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAG GGGCCTGAAGCTGTGCCGATGCGTATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACTGCATTTCAGATAGGCTT CACGATTTTCATCCCTTTTTTGATTATCGACCTGGTGATTGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCC CTGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCGGTTCGCTGGCG CAGAGCTTTTACAGCTAG Protein sequence : MRRLFSVAPVLLWLITPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGT PSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQ GPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA QSFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-29 | 44 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 7e-29 | 43 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 7e-29 | 43 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-25 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-25 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-25 | 42 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 3e-30 | 42 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 3e-30 | 42 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 3e-30 | 42 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 3e-30 | 42 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 3e-30 | 42 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-30 | 42 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 3e-30 | 42 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-30 | 42 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 3e-30 | 42 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 4e-30 | 42 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 2e-29 | 42 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-30 | 42 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 3e-22 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 3e-22 | 41 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 1e-29 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-29 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG2338 | Protein | 1e-91 | 85 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG2494 | Protein | 1e-75 | 68 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG1259 | Protein | 9e-65 | 61 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG2016 | Protein | 2e-60 | 56 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG0188 | Protein | 1e-33 | 42 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG0394 | Protein | 4e-31 | 42 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG0715 | Protein | 1e-29 | 42 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG0827 | Protein | 2e-30 | 42 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG0519 | Protein | 7e-30 | 41 |
| fliP | YP_002556821.1 | flagellar biosynthetic protein fliP | VFG0044 | Protein | 3e-33 | 41 |
